| Sequence 1: | NP_955402.1 | Gene: | Krt8 / 25626 | RGDID: | 2984 | Length: | 483 | Species: | Rattus norvegicus |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001260974.1 | Gene: | LamC / 36615 | FlyBaseID: | FBgn0010397 | Length: | 640 | Species: | Drosophila melanogaster |
| Alignment Length: | 515 | Identity: | 137/515 - (26%) |
|---|---|---|---|
| Similarity: | 229/515 - (44%) | Gaps: | 114/515 - (22%) |
- Green bases have known domain annotations that are detailed below.
|
Rat 22 SRSFTSGPGARISSSSFSRVGSSSSSFRGSLGGFGGAGVGGITAVTVNQSLLNPLKLEVDPNIQA 86
Rat 87 VRTQEKEQIKTLNNKFASFIDKVRFLEQQNKMLETKWSLLQQQ-KTSRSNMDNMFESYINNLRRQ 150
Rat 151 LEALGQEKLKLEVELGNMQGLVEDFK---------------------NKYEDEIN---------- 184
Rat 185 -------KRTEMENEFVL-----IKKDVDEAYMNKVELESRLEGLTDEINFLRQIHEEEIRELQS 237
Rat 238 ----QISDTSVVLSMDNSRSLDMDSIIAEVRAQYEEIANRSRAEAETMYQIKYEELQTLAGKHGD 298
Rat 299 DLRRSKTEISEMNRNISRLQAEIDALKGQRATLEAAIADAEQRGELAVKDANAKLEDLKNALQKA 363
Rat 364 KQDMARQLREYQELMNVKLALDIEIATYRKLLEGEESRL----------ESGMQNMSIHTKTTSG 418
Rat 419 YAGGLSSSYGGLTSPGFSYGMSSFQPGFGSVGGSSTYSRTKAVVVKKIETRDGKLVSESS 478 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Krt8 | NP_955402.1 | Head | 1..90 | 14/67 (21%) | |
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..43 | 10/20 (50%) | |||
| Keratin_2_head | <63..87 | CDD:292825 | 1/23 (4%) | ||
| Filament | 90..401 | CDD:278467 | 101/358 (28%) | ||
| Coil 1A | 91..126 | 13/34 (38%) | |||
| Linker 1 | 127..143 | 4/16 (25%) | |||
| Coil 1B | 144..235 | 27/133 (20%) | |||
| Linker 12 | 236..259 | 6/26 (23%) | |||
| Coil 2 | 260..398 | 45/137 (33%) | |||
| Necessary for interaction with PNN. /evidence=ECO:0000250 | 261..382 | 35/120 (29%) | |||
| DUF2570 | 282..>358 | CDD:305162 | 16/75 (21%) | ||
| Tail | 399..483 | 23/90 (26%) | |||
| LamC | NP_001260974.1 | Filament | 45..401 | CDD:278467 | 101/358 (28%) |
| ATP-synt_B | <67..>142 | CDD:304375 | 18/74 (24%) | ||
| MreC | <178..>224 | CDD:302802 | 11/45 (24%) | ||
| LTD | 473..574 | CDD:279300 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 2 | 1.910 | |||||