DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cd81 and Tsp42Er

DIOPT Version :10

Sequence 1:XP_063138178.1 Gene:Cd81 / 25621 RGDID:2315 Length:248 Species:Rattus norvegicus
Sequence 2:NP_523644.1 Gene:Tsp42Er / 35629 FlyBaseID:FBgn0033139 Length:211 Species:Drosophila melanogaster


Alignment Length:224 Identity:61/224 - (27%)
Similarity:99/224 - (44%) Gaps:50/224 - (22%)


- Green bases have known domain annotations that are detailed below.


  Rat    10 IKYLLFVFNFVFWLAGGVILGVALWLRHDPQTTSLLYLELGDKPAP-STFYVGIYILIAVGAVMM 73
            |:||.|:|||:.     .:||:|         |.::.:...|:.|| ....:|:|  ||||:::.
  Fly     8 IRYLAFLFNFLC-----AVLGIA---------TIVVNVIAIDQIAPKDQLILGLY--IAVGSIVF 56

  Rat    74 FVGFLGCYGAIQESQCLLGTFFTCLVILFACEVAAGIWGFV-----NKDQIAKDVKQFYDQALQQ 133
            .:.|.||:|||:||.|:...:.|.::::....:   :..||     .:|.|.| :||.:  |.|.
  Fly    57 LLSFFGCFGAIKESICVTWAYATSMLVMLIVSI---VMLFVFRMHFEEDSITK-LKQAF--AKQT 115

  Rat   134 AVMDDDANNAKAVVKTFHETLNCCGSNTLTTLTTTVLRNSLCPSSSNSFTQL-LKEDCHQKI--- 194
            ...|     |.|..:|.::   |||...|.......:   ..|||....... .::.|..|:   
  Fly   116 NTFD-----AMAEYQTQYQ---CCGIYKLKDYGDAYI---TVPSSCYDQNDTPYRDGCLAKMETQ 169

  Rat   195 -DELFSG------KLYLIGIAAIVVAVIM 216
             :||..|      .|.:|.|.|...:.||
  Fly   170 YEELLKGPKIVGWMLMVIEIGAFTFSTIM 198

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cd81XP_063138178.1 None
Tsp42ErNP_523644.1 Tetraspanin 8..195 CDD:459767 59/219 (27%)

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