DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ptprz1 and Lar

DIOPT Version :9

Sequence 1:NP_037212.2 Gene:Ptprz1 / 25613 RGDID:3455 Length:2316 Species:Rattus norvegicus
Sequence 2:NP_001260594.1 Gene:Lar / 35259 FlyBaseID:FBgn0000464 Length:2032 Species:Drosophila melanogaster


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptprz1NP_037212.2 alpha_CARP_receptor_like 45..298 CDD:239396
fn3 313..401 CDD:278470
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 433..499
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 518..537
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 586..624
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 636..720
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1141..1172
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1204..1228
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1401..1521
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1545..1622
PTPc 1717..1992 CDD:214550
PTPc 1753..1992 CDD:238006
Substrate binding. /evidence=ECO:0000250 1934..1940
PTPc 2023..2281 CDD:214550
PTPc 2051..2281 CDD:238006
LarNP_001260594.1 Ig 35..129 CDD:299845
I-set 36..129 CDD:254352
IG_like 146..227 CDD:214653
Ig 159..228 CDD:299845
I-set 234..318 CDD:254352
Ig3_RPTP_IIa_LAR_like 249..317 CDD:143216
fn3 324..404 CDD:278470
FN3 423..514 CDD:238020
FN3 520..610 CDD:238020
FN3 616..707 CDD:238020
FN3 712..810 CDD:238020
FN3 832..907 CDD:238020
FN3 914..1005 CDD:238020
FN3 1012..1101 CDD:238020
fn3 1106..1198 CDD:278470
PTPc 1476..1731 CDD:214550
PTPc 1503..1731 CDD:238006
PTPc 1763..2022 CDD:214550
PTPc 1791..2022 CDD:238006
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.