DRSC/TRiP Functional Genomics Resources

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Protein Alignment ZNF549 and crol

DIOPT Version :9

Sequence 1:NP_001186224.2 Gene:ZNF549 / 256051 HGNCID:26632 Length:640 Species:Homo sapiens
Sequence 2:NP_001245993.1 Gene:crol / 34592 FlyBaseID:FBgn0020309 Length:962 Species:Drosophila melanogaster


Alignment Length:577 Identity:198/577 - (34%)
Similarity:281/577 - (48%) Gaps:48/577 - (8%)


- Green bases have known domain annotations that are detailed below.


Human    67 GCLHGIEAEEAPSEQTLSAQGVSQARTPKLGPSIPNAHSCEMCILVMKDILYLSEHQGTLPWQKP 131
            |.:||::.    |....:..|.:.|..|...|.....|.|::|..:.:....|..|:.....:||
  Fly   188 GGIHGVDG----SGNGGNGGGQNVALAPDGTPIATGTHVCDICGKMFQFRYQLIVHRRYHSERKP 248

Human   132 YTSVASGKWFSFGSNLQQHQNQDSGEKHIRKEESSALLLNSCKIPLSDNLFPCKDVEKDFPTILG 196
            :.....|:.|:...:|.:|.                      ||.:...:|.|......|.....
  Fly   249 FMCQVCGQGFTTSQDLTRHG----------------------KIHIGGPMFTCIVCFNVFANNTS 291

Human   197 LLQHQTTHSRQE-YAHRSRETFQQRRYKCEQVFNEKVHVTEHQRVHTGEKAYKRREYGKSLNSKY 260
            |.:|...||..: :|...          |::.|..|.|:..|.|.||||..::.:...|:...|.
  Fly   292 LERHMKRHSTDKPFACTI----------CQKTFARKEHLDNHFRSHTGETPFRCQYCAKTFTRKE 346

Human   261 LFVEHQRTHNAEKPYVCNICGKSFLHKQTLVGHQQRIHTRERSYVCIECGKSLSSKYSLVEHQRT 325
            ..|.|.|.|..|.|:.|:||.|||..|:..|.|.. .||.:..:.|..|||..:.|..|..|.|:
  Fly   347 HMVNHVRKHTGETPHRCDICKKSFTRKEHYVNHYM-WHTGQTPHQCDVCGKKYTRKEHLANHMRS 410

Human   326 HNGEKPYVCNVCGKSFRHKQTFVGHQQRI--HTGERPYVCMECGKSFIHSYDRIRHQRVHTGEGA 388
            |..|.|:.|.:|||||..|:.|..|   |  ||||.|:.|..|.|:|......:.|.|.||||..
  Fly   411 HTNETPFRCEICGKSFSRKEHFTNH---ILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESP 472

Human   389 YQCSECGKSFIYKQSLLDHHRIHTGERPYECKECGKAFIHKKRLLEHQRIHTGEKPYVCIICGKS 453
            ::||.|.|:|..|:.|::|.|.||||.|::|..|.|||..|..::.|.|.||||.|:.|..|.|:
  Fly   473 HRCSYCMKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHVRQHTGESPHKCTYCTKT 537

Human   454 FIRSSDYMRHQRIHTGERAYECSDCGKAFISKQTLLKHHKIHTRERPYECSECGKGFYLEVKLLQ 518
            |.|......|.|.|||:..:.||.|.|.|..|:.|..|.::||.:.|::|..|.|.|..:..|..
  Fly   538 FTRKEHLTNHVRQHTGDSPHRCSYCKKTFTRKEHLTNHVRLHTGDSPHKCEYCQKTFTRKEHLNN 602

Human   519 HQRIHTREQLCECNECGKVFSHQKRLLEH-QKVHTGEKPCECSECGKCFRHRTSLIQHQKVHSG- 581
            |.|.|:.:....||.|.|.|:.::.|:.| .:.|||::|..|..|||.|..:.:|:.||:.|:. 
  Fly   603 HMRQHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFTCETCGKSFPLKGNLLFHQRSHTKG 667

Human   582 ---ERPYNCTACEKAFIYKNKLVEHQRIHTGEKPYECGKCGKAFNKRYSLVRHQKVH 635
               |||:.|..|.|.||.|..||.|.|.|:||||:.|..|.|||.:|.:|.||.|::
  Fly   668 QEMERPFACEKCPKNFICKGHLVSHMRSHSGEKPHACTLCSKAFVERGNLKRHMKMN 724

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZNF549NP_001186224.2 KRAB 27..67 CDD:307490 198/577 (34%)
COG5048 223..603 CDD:227381 152/386 (39%)
C2H2 Zn finger 224..241 CDD:275368 6/16 (38%)
C2H2 Zn finger 249..269 CDD:275368 5/19 (26%)
C2H2 Zn finger 277..298 CDD:275368 9/20 (45%)
C2H2 Zn finger 306..326 CDD:275368 8/19 (42%)
C2H2 Zn finger 334..355 CDD:275368 10/22 (45%)
C2H2 Zn finger 363..383 CDD:275368 6/19 (32%)
C2H2 Zn finger 391..411 CDD:275368 9/19 (47%)
C2H2 Zn finger 419..439 CDD:275368 8/19 (42%)
C2H2 Zn finger 447..467 CDD:275368 7/19 (37%)
C2H2 Zn finger 475..495 CDD:275368 8/19 (42%)
C2H2 Zn finger 503..523 CDD:275368 7/19 (37%)
C2H2 Zn finger 531..551 CDD:275368 7/20 (35%)
C2H2 Zn finger 559..579 CDD:275368 8/19 (42%)
C2H2 Zn finger 587..607 CDD:275368 10/19 (53%)
zf-H2C2_2 600..624 CDD:316026 14/23 (61%)
C2H2 Zn finger 615..635 CDD:275368 10/19 (53%)
crolNP_001245993.1 C2H2 Zn finger 223..243 CDD:275368 4/19 (21%)
C2H2 Zn finger 251..271 CDD:275368 5/41 (12%)
C2H2 Zn finger 279..299 CDD:275368 4/19 (21%)
COG5048 300..723 CDD:227381 170/436 (39%)
C2H2 Zn finger 307..327 CDD:275368 6/29 (21%)
C2H2 Zn finger 335..355 CDD:275368 5/19 (26%)
C2H2 Zn finger 363..383 CDD:275368 9/20 (45%)
C2H2 Zn finger 391..411 CDD:275368 8/19 (42%)
C2H2 Zn finger 419..439 CDD:275368 10/22 (45%)
C2H2 Zn finger 447..467 CDD:275368 6/19 (32%)
C2H2 Zn finger 475..495 CDD:275368 9/19 (47%)
C2H2 Zn finger 503..523 CDD:275368 8/19 (42%)
C2H2 Zn finger 531..551 CDD:275368 7/19 (37%)
C2H2 Zn finger 559..579 CDD:275368 8/19 (42%)
C2H2 Zn finger 587..607 CDD:275368 7/19 (37%)
C2H2 Zn finger 615..636 CDD:275368 7/20 (35%)
C2H2 Zn finger 644..664 CDD:275368 8/19 (42%)
C2H2 Zn finger 676..696 CDD:275368 10/19 (53%)
C2H2 Zn finger 704..722 CDD:275368 9/17 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.910

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