DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Oprm1 and AstC-R1

DIOPT Version :9

Sequence 1:NP_001033690.1 Gene:Oprm1 / 25601 RGDID:3234 Length:468 Species:Rattus norvegicus
Sequence 2:NP_649040.2 Gene:AstC-R1 / 40020 FlyBaseID:FBgn0036790 Length:483 Species:Drosophila melanogaster


Alignment Length:426 Identity:130/426 - (30%)
Similarity:206/426 - (48%) Gaps:78/426 - (18%)


- Green bases have known domain annotations that are detailed below.


  Rat    45 LNRTGLGGNDSLCPQ-----TGSP----------SMVTAITIMALYSIVCVVGLFGNFLVMYVIV 94
            ||...:.|:.::.|:     |..|          |.....|:: ||..||::|||||.||:||::
  Fly    40 LNHRWISGSSTIQPEESLYGTDLPTYQHCIATRNSFADLFTVV-LYGFVCIIGLFGNTLVIYVVL 103

  Rat    95 RYTKMKTATNIYIFNLALADALATSTLPFQSVNYLMGTWPFGTILCKIVISIDYYNMFTSIFTLC 159
            |::||:|.|||||.|||:||......:||......:.:|.||..:||..:.......|||...|.
  Fly   104 RFSKMQTVTNIYILNLAVADECFLIGIPFLLYTMRICSWRFGEFMCKAYMVSTSITSFTSSIFLL 168

  Rat   160 TMSVDRYIAVCHPVKALDFRTPRNAKIVNVCNWILSSAIGLPVMFMATTKYRQGSIDCTLTFSHP 224
            .||.|||||||||:.:..:||...||:|:...|..|:.:.|||:..|:|..::..|:.:.....|
  Fly   169 IMSADRYIAVCHPISSPRYRTLHIAKVVSAIAWSTSAVLMLPVILYASTVEQEDGINYSCNIMWP 233

  Rat   225 TWYWEN---LLKICVFIFAFIMPVLIITVCYGLMILRLKSVRMLSG--SKEKDRNLRRITRMVLV 284
            ..|.::   ...:..|...|..|:..|...|.|:|.:|:||....|  ||||.|..|::||:||.
  Fly   234 DAYKKHSGTTFILYTFFLGFATPLCFILSFYYLVIRKLRSVGPKPGTKSKEKRRAHRKVTRLVLT 298

  Rat   285 VVAVFIVCWTP--------IH--------------IYVIIKALITIPETTFQTVSWHFCIALGYT 327
            |::|:|:||.|        ||              |::::.||:                   |:
  Fly   299 VISVYILCWLPHWISQVALIHSNPAQRDLSRLEILIFLLLGALV-------------------YS 344

  Rat   328 NSCLNPVLYAFLDENFKRC-FREF-CI---PTSSTIEQQNSTRVRQNTREHPSTANTVDRTNHQP 387
            ||.:||:|||||.|||::. |:.| |:   ..::.::.:.|...:|.:::...:...:......|
  Fly   345 NSAVNPILYAFLSENFRKSFFKAFTCMNKQDINAQLQLEPSVFTKQGSKKRGGSKRLLTSNPQIP 409

  Rat   388 AL----------AVSVAQIFTGYPSPTHG-EKPCKS 412
            .|          :.:.:...|...:.|.| :|.|.|
  Fly   410 PLLPLNAGNNNSSTTTSSTTTAEKTGTTGTQKSCNS 445

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Oprm1NP_001033690.1 7tm_4 77..>281 CDD:304433 80/208 (38%)
7tm_1 85..336 CDD:278431 94/277 (34%)
NPxxY, plays a role in stabilizing the activated conformation of the receptor. /evidence=ECO:0000250|UniProtKB:P42866 332..336 2/3 (67%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 361..385 2/23 (9%)
AstC-R1NP_649040.2 7tm_4 88..368 CDD:304433 107/298 (36%)
7tm_1 94..353 CDD:278431 94/277 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm9091
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24229
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X22
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
66.010

Return to query results.
Submit another query.