Sequence 1: | NP_037177.2 | Gene: | Tnr / 25567 | RGDID: | 3886 | Length: | 1358 | Species: | Rattus norvegicus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_609018.3 | Gene: | CG9500 / 33888 | FlyBaseID: | FBgn0031804 | Length: | 292 | Species: | Drosophila melanogaster |
Alignment Length: | 298 | Identity: | 102/298 - (34%) |
---|---|---|---|
Similarity: | 155/298 - (52%) | Gaps: | 46/298 - (15%) |
- Green bases have known domain annotations that are detailed below.
Rat 1073 LTYKSTDGSRKELIVDAE----DTWIR----LEGLSENTDYTVLLQAAQEATRSSLT-------S 1122
Rat 1123 TIFTTG--GRVFSHPQDCAQHLMNGDTLSGVYTIFLNGELSHKLQVYCDMTTDGGGWIVFQRRQN 1185
Rat 1186 GQTDFFRKWADYRVGFGNLEDEFWLGLDNIHRITAQGRYELRVDMRD--GQEAVFAYYDKFAVED 1248
Rat 1249 SRSLYKL-RIGGYNGTAGDSLSYHQGRPFSTEDRDNDVAVTNCAMSYKGAWWYKNCHRTNLNGKY 1312
Rat 1313 -----GESRHSQGINWYHWKGHEFSIPFVEMKMRPYIH 1345 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Tnr | NP_037177.2 | exchanger_TraA | <190..>328 | CDD:411343 | |
EGF_Tenascin | 203..231 | CDD:376143 | |||
fn3 | 328..398 | CDD:394996 | |||
fn3 | 416..496 | CDD:394996 | |||
fn3 | 507..586 | CDD:394996 | |||
FN3 | 595..679 | CDD:238020 | |||
fn3 | 687..766 | CDD:394996 | |||
fn3 | 776..855 | CDD:394996 | |||
fn3 | 865..944 | CDD:394996 | |||
fn3 | 954..1026 | CDD:394996 | |||
FN3 | 1042..1127 | CDD:238020 | 16/68 (24%) | ||
FReD | 1134..1342 | CDD:238040 | 78/215 (36%) | ||
CG9500 | NP_609018.3 | FReD | 76..287 | CDD:238040 | 80/220 (36%) |
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG2579 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 1 | 1.000 | - | - | mtm12326 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_100073 | |
Panther | 1 | 1.100 | - | - | O | PTHR19143 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
5 | 4.810 |