DRSC/TRiP Functional Genomics Resources

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Protein Alignment Snai2 and esg

DIOPT Version :9

Sequence 1:NP_037167.1 Gene:Snai2 / 25554 RGDID:3722 Length:268 Species:Rattus norvegicus
Sequence 2:NP_476600.1 Gene:esg / 34903 FlyBaseID:FBgn0001981 Length:470 Species:Drosophila melanogaster


Alignment Length:259 Identity:137/259 - (52%)
Similarity:161/259 - (62%) Gaps:35/259 - (13%)


- Green bases have known domain annotations that are detailed below.


  Rat    17 PNYSELD--THTVIISPYLCESYPMPVIPKPEILTSGAYSPITVWTSAVPFHSPLPSGLSPLTGY 79
            |.|..|.  |||        ..:..|:.|   ..:..:|..:...|......|.||..|| |...
  Fly   215 PGYPSLGGYTHT--------HHHHAPISP---AYSENSYYSMRSMTPESSCSSSLPEDLS-LKHK 267

  Rat    80 SSSLGRVSPLPSSDTSSKDHSGSESP-----ISDEEERLQPKLSDPHAIEAEKFQCNLCNKTYST 139
            :.:|...:..|....::|  :|..||     .|.::::.||          .::||..|.|:|||
  Fly   268 NLNLNLNTSQPGEQAAAK--TGDMSPETMPNASAKKDKNQP----------PRYQCPDCQKSYST 320

  Rat   140 FSGLAKHKQLHCDA----QARKSFSCKYCDKEYVSLGALKMHIRTHTLPCVCKICGKAFSRPWLL 200
            ||||.||:|.||.|    |.:||||||.|||.||||||||||||||||||.|.:|||||||||||
  Fly   321 FSGLTKHQQFHCPAAEGNQVKKSFSCKDCDKTYVSLGALKMHIRTHTLPCKCNLCGKAFSRPWLL 385

  Rat   201 QGHIRTHTGEKPFSCPHCNRAFADRSNLRAHLQTHSDVKKYQCKNCSKTFSRMSLLHKHEESGC 264
            |||||||||||||||.||:||||||||||||||||||:|||.|.:|||||||||||.||.|.||
  Fly   386 QGHIRTHTGEKPFSCQHCHRAFADRSNLRAHLQTHSDIKKYSCTSCSKTFSRMSLLTKHSEGGC 449

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Snai2NP_037167.1 SNAG domain. /evidence=ECO:0000250 1..20 1/2 (50%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 84..116 7/36 (19%)
SFP1 <86..182 CDD:227516 48/104 (46%)
C2H2 Zn finger 130..150 CDD:275370 13/19 (68%)
C2H2 Zn finger 161..181 CDD:275368 17/19 (89%)
C2H2 Zn finger 187..207 CDD:275368 17/19 (89%)
zf-H2C2_2 200..223 CDD:404364 20/22 (91%)
zf-C2H2 213..235 CDD:395048 19/21 (90%)
C2H2 Zn finger 215..235 CDD:275368 17/19 (89%)
C2H2 Zn finger 243..259 CDD:275368 12/15 (80%)
esgNP_476600.1 zf-C2H2 309..331 CDD:278523 14/21 (67%)
C2H2 Zn finger 311..331 CDD:275370 13/19 (68%)
zf-C2H2 344..366 CDD:278523 19/21 (90%)
C2H2 Zn finger 346..366 CDD:275368 17/19 (89%)
zf-C2H2 370..392 CDD:278523 18/21 (86%)
C2H2 Zn finger 372..392 CDD:275368 17/19 (89%)
zf-H2C2_2 385..408 CDD:290200 20/22 (91%)
zf-C2H2 398..420 CDD:278523 19/21 (90%)
C2H2 Zn finger 400..420 CDD:275368 17/19 (89%)
C2H2 Zn finger 428..444 CDD:275368 12/15 (80%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 50 1.000 Domainoid score I11362
eggNOG 1 0.900 - - E1_KOG2462
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004977
OrthoInspector 1 1.000 - - mtm8936
orthoMCL 1 0.900 - - OOG6_107394
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X955
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.710

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