Sequence 1: | NP_037166.2 | Gene: | Slc6a4 / 25553 | RGDID: | 3714 | Length: | 630 | Species: | Rattus norvegicus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_609726.1 | Gene: | CG15279 / 34863 | FlyBaseID: | FBgn0028886 | Length: | 639 | Species: | Drosophila melanogaster |
Alignment Length: | 641 | Identity: | 212/641 - (33%) |
---|---|---|---|
Similarity: | 348/641 - (54%) | Gaps: | 68/641 - (10%) |
- Green bases have known domain annotations that are detailed below.
Rat 1 METTPLNSQKVLSECKDREDCQENGVLQKGVPTTADRAEPSQISNGYSAVPSTSAGDEASHSIPA 65
Rat 66 ATTTLVAEIRQGERETWGKKMDFLLSVIGYAVDLGNIWRFPYICYQNGGGAFLLPYTIMAIFGGI 130
Rat 131 PLFYMELALGQYHRNGCISIWRKICPIFKGIGYAICIIAFYIASYYNTIIAWALYYLISSLTDRL 195
Rat 196 PWTSCTNSWNTGNCTNYFAQDNITW-------------TLHS-----TSPAEEFYLRHVLQIHQS 242
Rat 243 KGLQD-LGTISWQLTLCIVLIFTVIYFSIWKGVKTSGKVVWVTATFPYIVLSVLLVRGATLPGAW 306
Rat 307 RGVVFYLKPNWQKLLETGVWVDAAAQIFFSLGPGFGVLLAFASYNKFNNNCYQDALVTSVVNCMT 371
Rat 372 SFVSGFVIFTVLGYMA-EMRNEDVSEVAKDAGPSLLFITYAEAIA---NMPASTFFAIIFFLMLI 432
Rat 433 TLGLDSTFAGLEGVITAVLDEFPHI--WAKRREWFVLIVVITCVLGSLLTLTSGGAYVVTLLEEY 495
Rat 496 ATGPAVLTVALIEAVAVSWFYGITQFCSDVKEMLGFSPGWFWRICWVAISPLFLLFIICSFLMSP 560
Rat 561 PQLRLFQYNYPHWSIVLGYCIGMSSVICIPTYIIYRLISTPG-TLKERIIKSITPE 615 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Slc6a4 | NP_037166.2 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 23..60 | 8/36 (22%) | |
5HT_transport_N | 24..64 | CDD:397524 | 9/39 (23%) | ||
SLC6sbd_SERT | 79..615 | CDD:271399 | 194/561 (35%) | ||
Interaction with RAB4A. /evidence=ECO:0000250 | 616..624 | 212/641 (33%) | |||
CG15279 | NP_609726.1 | SLC5-6-like_sbd | 50..598 | CDD:294310 | 193/560 (34%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D250396at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.920 |