DRSC/TRiP Functional Genomics Resources

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Protein Alignment Slc5a1 and CG6723

DIOPT Version :9

Sequence 1:NP_037165.1 Gene:Slc5a1 / 25552 RGDID:3713 Length:665 Species:Rattus norvegicus
Sequence 2:NP_650069.2 Gene:CG6723 / 41368 FlyBaseID:FBgn0037895 Length:587 Species:Drosophila melanogaster


Alignment Length:595 Identity:133/595 - (22%)
Similarity:245/595 - (41%) Gaps:101/595 - (16%)


- Green bases have known domain annotations that are detailed below.


  Rat    28 DISVIVIYFVVVMAVGLWAMFSTNRGTVGGFFLAGRSMVWWPIGASLFASNIGSGHFVGLAGTGA 92
            |....|..|::.:.:|::..|.....:...:.|.||.|:..||..||.||.:.....:||.....
  Fly    18 DYVAFVSMFLLCIGIGIYFGFMNKSVSEDDYMLGGRKMLVIPIAFSLVASFVSGITLLGLPTEVY 82

  Rat    93 AAGIAMGGFEWNALVFVVVLGWLFVPIYIKAGVVTMPEYLRKRFGGKRIQIYLSVLSLLLYIFTK 157
            :.||.........:...||:|..::|::....:.:..|||..|| .:|:::|.||:..::.: ..
  Fly    83 SYGIQYLYVSCGVIGMGVVMGVFYLPVFHDLNITSTYEYLEVRF-DRRLRLYGSVMFAIMNV-AY 145

  Rat   158 ISADIFSGAIFINLALGLDIYLAIFILLAITALYTITGGLAAVIYTDTLQTAIMLVGSFILTGF- 221
            :...|:..|:..|...|:.::....|:..|...||..|||.||::||.:| ||.::|:..|... 
  Fly   146 LPIVIYVPALAFNQVTGIGVHTITPIVCIICVFYTSLGGLKAVVWTDVVQ-AISMLGALCLVAIK 209

  Rat   222 AFREVGGYEAFMDKYMKAIPTLVSDGNITVKEECYTPRADSFHIFRDPITGDMPWPGLIFGLSIL 286
            ..|::||                  ..:.::....:.|.::..:..||......| .|.||    
  Fly   210 GTRDIGG------------------AGVVLERAWSSDRLEAPDLSIDPTVRHTFW-CLFFG---- 251

  Rat   287 ALWYW----CTDQVIVQRCLSAKNMSHV-KAGCTLC-GYLKLLPMFLMVMPGMISRILY------ 339
            .:.||    ...|.::||.||..::... ||.|..| |.|     .||.:.|....::|      
  Fly   252 GIVYWTQTNAVSQNMIQRYLSLPSLGDARKALCIFCVGVL-----ILMALCGYNGLLIYATYQNC 311

  Rat   340 ---TDKIA----CVLPSECKKYCGTPVGCTNIAYPTLVVELMPNGLRGLMLSVMMASLMSSLTSI 397
               |.|:|    .:||....|..|.                :| |:.||.::.:.::.:|||::.
  Fly   312 DPLTTKLAKARDQLLPLFVMKTLGE----------------LP-GMTGLFIAGVFSAALSSLSTC 359

  Rat   398 FNSASTLFTMD-IYTKIRKGASEKELMIAGRLFILVLIGISIAWVPIVQSAQ-SGQLFDYIQSIT 460
            .||.|.:...| :...::|..|...:   ..:..||::|:.:..|.:|...: .|.:.....|:.
  Fly   360 LNSMSAVVLEDFVKPYVKKPLSSSAI---NWIMRLVVVGVGVLCVCLVYVVEHMGTVLQLTMSLE 421

  Rat   461 SYLGPPIAAVFLLAIFCKRVNEPGAFWGLILGFLIGIS--RMITEFAYGTGSC---MEPSNCPKI 520
            :....|:..:|.:.:|...:|...|..|.::| :|.:|  .:..::|..:|:.   .:|.|..: 
  Fly   422 AITNGPLFGIFTIGLFLPWINGNSALVGGVMG-VIAMSWVSLNAQWAIASGAITYKTKPLNVEQ- 484

  Rat   521 ICGVHYLYFAIILFAISVVTVLV-ISLLTKPIPDVH-LYRLCWSLRNSTEERIDLDA-------- 575
             |.          ::.:|.|.|. .:.|.....|:. |||:.:....:....|.:..        
  Fly   485 -CD----------YSFNVTTSLANTTHLGASAEDIFPLYRISYMWYTTFGASITIFVALLGTFVF 538

  Rat   576 GEEEPVEEDP 585
            |:..|.:.||
  Fly   539 GKNNPNKVDP 548

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Slc5a1NP_037165.1 SLC5-6-like_sbd 27..665 CDD:382020 133/595 (22%)
CG6723NP_650069.2 SLC5sbd_NIS-SMVT 17..537 CDD:271383 129/582 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166340285
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.740

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