DRSC/TRiP Functional Genomics Resources

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Protein Alignment Slc5a1 and CG5687

DIOPT Version :9

Sequence 1:NP_037165.1 Gene:Slc5a1 / 25552 RGDID:3713 Length:665 Species:Rattus norvegicus
Sequence 2:NP_001286910.1 Gene:CG5687 / 38255 FlyBaseID:FBgn0035293 Length:683 Species:Drosophila melanogaster


Alignment Length:584 Identity:139/584 - (23%)
Similarity:248/584 - (42%) Gaps:110/584 - (18%)


- Green bases have known domain annotations that are detailed below.


  Rat    15 APIQSYERIRNAADISVIVIYFVVVMAVGLWAMFSTNRGTVGGFFLAGRSMVWWPIGASLFASNI 79
            ||  |::...:..|..:::...|:.:.:|::..|....|:....||.|..|..:|:..||..|.|
  Fly    89 AP--SHKATFSGYDYVILLGMLVISLGIGIFYGFFQKGGSSSNEFLLGSEMSIFPVTLSLTTSFI 151

  Rat    80 GSGHFVGLAGTGAAAGIAMGGFEWNALVFVVVLG---WLFVPIYIKAGVVTMPEYLRKRFGGKRI 141
            .:   :.|.|..:........|....:..|:|:.   .:|.|||.|..:.:..|||..|| ||.|
  Fly   152 TA---IELLGNPSEMYFQGTQFVLIVIPMVIVIPVAVKIFYPIYFKMELTSCYEYLGIRF-GKEI 212

  Rat   142 QIYLSVLSLL-LYIFTKISADIFSGAIFINLALGLDIYLAIFILLAITALYTITGGLAAVIYTDT 205
            :|..:||.:: :..:|.::  :.:.||.::.|.|||..:|:.::..:...|:..||:.||:..|:
  Fly   213 RILGAVLYVIQMCFYTAVA--VLAPAIALSKATGLDTKIAVVLIYVVCVFYSSQGGMKAVVIADS 275

  Rat   206 LQTAIMLVGSFILTGF-AFREVGGYEAFMDKYMKAIPTLVSDGNITVKEECYTPRADSFHIFRDP 269
            .|.|::.|...::.|. .|......:.|.         ..||.|          |.:.|::..||
  Fly   276 FQAAVLAVSLVLIVGLGCFYSGNPIQVFQ---------TASDHN----------RLEFFNMDPDP 321

  Rat   270 ITGDMPWPGLIFGLSILALWYW----CTDQVIVQRCLSAKN--MSHVKAGCTLCGYLKLLPMFLM 328
            .|....|..:|.|     .:||    ||:|..||:|:|.|:  ::.:..|..:.|   |:.:||:
  Fly   322 TTRHTVWSVVIGG-----FFYWTSLFCTNQASVQKCMSLKSLRLAKIALGFAIIG---LIVVFLL 378

  Rat   329 VMPGMISRILYTDKIACVLPSECKKYCGTPVGCTNIAYPTLVVELMP--NGLRGLMLSVMMASLM 391
                    ..||..:.....::|.......:..|:...|..|:....  :.:.|:.::.:.|:.:
  Fly   379 --------NFYTGLMVFTHYADCDPLTAGRISATDQLLPYYVINTYEHISSVAGIFVAGIFAASL 435

  Rat   392 SSLTSIFNSASTLFTMDIYT-----KI--RKGASEKELMIAGRLFILVLIGI-SIAWVPIVQSAQ 448
            .::.|..||.|.:...|:..     ||  .|||:..:.|..|       .|| |...|.||:  .
  Fly   436 GTVASALNSLSAVTCEDLLVNGMNIKISPEKGATYAKWMSLG-------FGIASFGLVFIVE--H 491

  Rat   449 SGQLFDYIQSITSYLGPPIAAVFLLAIFCKRVNEPGAFWG----LILGFLIGISRMITEFAYGTG 509
            .|.:.....::...:|.....:|:|.|.||:.|..|||:|    |.|...:|:...|..      
  Fly   492 LGGVLQATLTLNGLIGGVTLGLFVLGIACKQANTKGAFYGGLLSLALVIFVGVVAQIVS------ 550

  Rat   510 SCME----PSNCPKIICGVHYLYFAIILFAISVVTVLVISLLTKPIPDVH--------LYRLCW 561
              :|    |::..|..|.|:             :|.::.||||:|:..:.        ::||.:
  Fly   551 --VEQPALPTSIDKCDCHVN-------------MTNIIGSLLTEPLEVIEEGGFTSWPIFRLSY 599

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Slc5a1NP_037165.1 SLC5-6-like_sbd 27..665 CDD:382020 136/572 (24%)
CG5687NP_001286910.1 SLC5sbd_NIS-SMVT 99..620 CDD:271383 136/572 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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