DRSC/TRiP Functional Genomics Resources

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Protein Alignment Slc5a1 and CG33124

DIOPT Version :9

Sequence 1:NP_037165.1 Gene:Slc5a1 / 25552 RGDID:3713 Length:665 Species:Rattus norvegicus
Sequence 2:NP_001097056.3 Gene:CG33124 / 318891 FlyBaseID:FBgn0053124 Length:588 Species:Drosophila melanogaster


Alignment Length:624 Identity:130/624 - (20%)
Similarity:247/624 - (39%) Gaps:127/624 - (20%)


- Green bases have known domain annotations that are detailed below.


  Rat    28 DISVIVIYFVVVMAVGLW---------AMFSTNRGT------------VGGFFLAGRSMVWWPIG 71
            |.:|.:...::.:|:||:         .|.|:...|            :..:.:....:..:|:.
  Fly    10 DYTVFLGVTILSIAIGLYFGWIKKTKKEMESSPADTPEISIPNFGSKKMNEYLMGSGHLKVFPVA 74

  Rat    72 ASLFASNIGSGHFVGLAGTGAAAGIAMGGFEWNALVFVVVL-----GWLFVPIYIKAGVVTMPEY 131
            .||.||.|.     |:|..|..:.|...|.:::.:|..:|:     .::::|::....|.:..||
  Fly    75 MSLIASFIS-----GVAILGNPSEIYYYGTQYSLIVLAIVIQGLAVSYIYLPVFSALQVRSSYEY 134

  Rat   132 LRKRFGG--KRIQIYLSVLSLLLYI-FTKISADIFSGAIFINLALGLDIYLAIFILLAITALYTI 193
            |..||..  :.|...:.|:.:|||. |.     :|..|:.:|.|.||:|::...:::.:..:||:
  Fly   135 LGMRFHPLIRNIVSIMFVIEVLLYTPFV-----VFVPALALNQASGLNIHMIEVLIIVVCVIYTL 194

  Rat   194 TGGLAAVIYTDTLQTAIMLVGSFILTGFAFREVGGYEAFMDKYMKAIPTLVSDGNITVKEECYTP 258
            .|||.||::||..|..||.....::...|...:...:.|.:       :||..|.:...      
  Fly   195 LGGLKAVVHTDIWQVVIMFASVVVVAILATCYITDLDDFFE-------SLVDGGRLIFG------ 246

  Rat   259 RADSFHIFRDPITGDMPWPGLIFGLSILALWYW----CTDQVIVQRCLSAKNMSHVKAGCTLCGY 319
                 :|...|...:..|..:|.|     .:||    ...|.:|.|.:|..|:...:........
  Fly   247 -----NINPSPYVRNTVWSVVIGG-----AFYWTSITAVHQTMVHRYMSLPNLKMARTSIAFFVL 301

  Rat   320 LKLLPMFLMVMPGMISRILYTDKIACVLPSECKKYCGTPVGCTNIAYPTLVVELMPN--GLRGLM 382
            ..::...::...|::...:|.|         |.......:...:...|..||:.:.:  |:.||.
  Fly   302 GSIIFYSVLSFLGLLIFNMYKD---------CDPLSAGQIMNNDQLVPLFVVQSVGHIYGIPGLF 357

  Rat   383 LSVMMASLMSSLTSIFNSASTLFTMDIYT---KIRKGASEKELMIAGRLFILVLIGISIAWVPIV 444
            ::.:..:.:|||:...||.|.:...||..   |::.|.:...:::..   .:|::|..:....::
  Fly   358 IAGIFGAGLSSLSVFLNSTSLVILQDIVRGCFKMQPGETASAIIVKA---TIVIMGALVFGEVLL 419

  Rat   445 QSAQSGQLFDYIQSITSYLGPPIAAVFLLAIFCKRVNEPGAFWGLILGFLI-GISRMITEFAYGT 508
            ....|| :.....|:.:........:|.||:.....|..|...|.|.|||: |.....::.|..:
  Fly   420 LEKVSG-ILSICMSLVAIATSSTFGIFTLAVLVPWANTVGTAVGGIAGFLLTGWITFGSQIAAAS 483

  Rat   509 GSC------MEPSNCPKIICGVHYLYF----AIILFAIS--------VVTVLV----ISLLTKPI 551
            |..      :..::||..:.....::.    ...||.:|        .:||:|    :||:|||.
  Fly   484 GQLHHHRLPVSVASCPGNVTARENVWVDEEQVFPLFRLSFHWINPIGALTVVVVGSLVSLVTKPT 548

  Rat   552 -----------PDVH--LYRLCWSLRNSTEERIDLDAGE 577
                       |.:|  |.:.|:..||       ||..|
  Fly   549 DIKSLDSDLISPVIHRFLPKECFKQRN-------LDKSE 580

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Slc5a1NP_037165.1 SLC5-6-like_sbd 27..665 CDD:382020 130/624 (21%)
CG33124NP_001097056.3 SLC5sbd_NIS-SMVT 9..533 CDD:271383 113/568 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166340235
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D243316at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.750

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