DRSC/TRiP Functional Genomics Resources

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Protein Alignment Slc5a1 and CG31262

DIOPT Version :9

Sequence 1:NP_037165.1 Gene:Slc5a1 / 25552 RGDID:3713 Length:665 Species:Rattus norvegicus
Sequence 2:NP_001138069.2 Gene:CG31262 / 318649 FlyBaseID:FBgn0051262 Length:579 Species:Drosophila melanogaster


Alignment Length:633 Identity:126/633 - (19%)
Similarity:234/633 - (36%) Gaps:154/633 - (24%)


- Green bases have known domain annotations that are detailed below.


  Rat    29 ISVIVIYFVVVMAVGLWAMFS------------------TNRGT--VGGFFLAGRSMVWWPIGAS 73
            :..:|:..:.:::.|....|.                  ||.|:  :..:.:..|:|...|:..:
  Fly     9 VDYLVLVAMTLLSTGTGIYFGALKKKHKNKKSVSEDNRRTNFGSEKIDEYLMGSRNMKVIPVSIT 73

  Rat    74 LFASNIGSGHFVGLAGTGAAAGIAMGGFEWNALVFVVVL-----GWLFVPIYIKAGVVTMPEYLR 133
            |:       ....:.||  .:.|...|.::..::..::|     .::::|:|....:.:..||| 
  Fly    74 LY-------RVTSIIGT--PSEIYHYGTQYYLIIVAIILQGIAFSYVYLPVYSALQIGSAYEYL- 128

  Rat   134 KRFGGKRIQIYLSVLSLLLYIF---TKISADIFSGAIFINLALGLDIYLAIFILLAITALYTITG 195
                |.|....:...:..:|:|   |.:...::..|:.::...||:.:|...:::.....||..|
  Fly   129 ----GLRFNSIIRTTASFMYVFGILTYLPFIVYVPALSLSQVSGLNTHLIGLVIILACVTYTFMG 189

  Rat   196 GLAAVIYTDTLQTAIMLVGSFILTGFAFREVGGYEAFMDKYMKAIPTLVSDGNITVKEECYTPRA 260
            ||.||::||..|.|:|.:....:...|.....|..|..|...:....::::.|            
  Fly   190 GLKAVVHTDVWQVAVMFLSLVAVAFLAIYYSNGLVAVFDDAEQGGRLMLANTN------------ 242

  Rat   261 DSFHIFRDPITGDMPWPGLIFGLSILALWYWCT----DQVIVQRCLSAKNMSH-----------V 310
                  ..|......|..||.|.|     :|.:    .|.:|||.:|..::..           |
  Fly   243 ------PSPYVRHTVWSVLIGGFS-----FWTSVNAGGQHMVQRYMSLPSLKKSRQASFIFTIGV 296

  Rat   311 KAGCTLCGYLKLLPMFLMVM---PGMISRILYTDKIACVLPSECKKYCGTPVGCTNIAYPTLVVE 372
            .....||.::.|| :|....   |.....||..|::                      .|..||:
  Fly   297 SIFIALCCFMGLL-LFSKYKDCDPRSAGMILNDDQL----------------------LPLFVVQ 338

  Rat   373 LMPN--GLRGLMLSVMMASLMSSLTSIFNSASTLFTMDI---YTKIRKGASEKELMIAGRLFILV 432
            .:.:  |:.||.::.:..:.:|||:|.||:.|.:|..||   :.|:.....:..::|...:....
  Fly   339 SVGHIYGMPGLFIAGIFGAGLSSLSSCFNTVSMVFLEDIVRGFFKMEPSERQSTILIKTCIIFQG 403

  Rat   433 LIGISIAWVPIVQSAQSGQLFDYIQSITSYLGPPIAAVFLLAIFCKRVNEPG-AFWGLILGFLIG 496
            ::...|.:  ::|..:.  :.....||:|........||.|.:.....|..| |..||....|.|
  Fly   404 ILAFLIVF--LLQHLRG--ILSVCNSISSITAGTSFGVFTLGMLFPWANTIGTAVGGLSSVLLAG 464

  Rat   497 ISRMITEFAYGTG---SCMEPSNCPKIICGV-------------------HYLYFAIILFAISVV 539
            .....::.|..:|   |.|.|.:..:.:..|                   .|.:.:.|....:||
  Fly   465 WISFGSQIAAASGQLKSGMLPVSVKECVGNVTLPEDPWVDQDQVFPLYRLSYHWVSPIGVVTAVV 529

  Rat   540 TVLVISLLTKPI-----------PDVH--LYRLCWSLRN---STEERI 571
            ...::||:|||.           |.:|  |.|.|:..||   .|||.:
  Fly   530 VGALVSLITKPADIKTLHAELISPVIHRFLPRECFRGRNLNERTEESL 577

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Slc5a1NP_037165.1 SLC5-6-like_sbd 27..665 CDD:382020 126/633 (20%)
CG31262NP_001138069.2 SLC5sbd_NIS-SMVT 9..522 CDD:271383 108/576 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166340238
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D243316at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.750

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