DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Slc2a3 and sut2

DIOPT Version :9

Sequence 1:XP_006237357.1 Gene:Slc2a3 / 25551 RGDID:3706 Length:495 Species:Rattus norvegicus
Sequence 2:NP_524732.1 Gene:sut2 / 44269 FlyBaseID:FBgn0028562 Length:491 Species:Drosophila melanogaster


Alignment Length:475 Identity:153/475 - (32%)
Similarity:254/475 - (53%) Gaps:9/475 - (1%)


- Green bases have known domain annotations that are detailed below.


  Rat     9 TPSLVFAVTVATIG-SFQFGYNTGVINAPETIIKDFLNYTLEERLEDLPSEGLLTTLWSLCVAIF 72
            ||.|:......|:| :...||..||:|||..|||.:....|....:.:.:.|.|..||:..|:|:
  Fly    16 TPLLMLICLTVTLGTTIPVGYFFGVLNAPAEIIKKWCQDILANEYDTIVTAGQLDILWTSIVSIY 80

  Rat    73 SVGGMIGSFSVGLFVNRFGRRNSMLLVNLIAILGGCLMGFAKIAESVEMLILGRLIIGIFCGLCT 137
            .:||:.||....:..:::||:..:::.:::.::.|.|..:.:.|:|:|||:.||.:.||...|..
  Fly    81 LIGGICGSCFSAVLCDKYGRKGCLVISSVLFVVSGILFTWCRAAKSLEMLMTGRFLGGIASALIF 145

  Rat   138 GFVPMYIGEVSPTALRGAFGTLNQLGIVVGILVAQVFGLDFILGSEELWPGLLGLTIIPAILQSA 202
            ...|||:.|.:|:.|.|:.|....:|:..|||:|||..|..:||||.|||..|....:..:....
  Fly   146 TAQPMYLLESAPSELSGSVGVFTCIGVTGGILLAQVATLSHLLGSERLWPYALSFYSLLVMASLV 210

  Rat   203 ALPFCPESPRFLLINRKEEDQATEILQRLWG---TPDVIQEIQEMKDESIRMSQEKQVTVLELFK 264
            .|.:.|||||:|.:::::...:.:.|.||.|   ..:|.||:.|||......|..:..::..:.:
  Fly   211 LLWWFPESPRWLYLHKRDSAASEKALLRLRGRNTEEEVHQELLEMKATLEAKSSSEVSSLCSVLR 275

  Rat   265 SPSYFQPLLISVVLQLSQQFSGINAVFYYSTGIFQDAGVQE--PIYATIGAGVVNTIFTVVSLFL 327
            :...:.|||:....|.:||.|||||:|:||..|..:||..:  ..:..:|.|..|...:::...|
  Fly   276 NSELWLPLLLVCSFQATQQLSGINAIFFYSLSILTNAGFSDGAATWLNLGIGSFNLCTSLLGPLL 340

  Rat   328 VERAGRRTLHMIGLGGMAVCSVFMTISL--LLKDEYEAMSFVCIVAILVYVAFFEIGPGPIPWFI 390
            :.|..||.|.||.....|:..:.|::.|  |.:.|...:::.|...||.::..|::|.|||.:||
  Fly   341 IRRFPRRPLMMISCSMCALALLAMSLGLFFLERSESTVLTYFCAAFILTFILGFQLGLGPIAYFI 405

  Rat   391 VAELFSQGPRPAAMAVAGCSNWTSNFLVGMFFPSAAAYLGAYVFIIFAAFLVFFLIFTFFKVPET 455
            .:||....|||.||::....:|..||||||.||...:...::.||......::.|:.|:..:|||
  Fly   406 GSELLEDSPRPVAMSMGSLFSWIGNFLVGMCFPLLQSVWSSFAFIPCMCVCIYCLLLTWRYLPET 470

  Rat   456 KGRTFEDITRAFEGQAQSGK 475
            :||..:|: :....|..|.|
  Fly   471 RGREPKDV-KLLMSQGLSSK 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Slc2a3XP_006237357.1 Sugar_tr 15..467 CDD:278511 147/459 (32%)
MFS 16..450 CDD:119392 141/441 (32%)
sut2NP_524732.1 Sugar_tr 23..473 CDD:278511 144/449 (32%)
MFS 76..466 CDD:119392 124/389 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166337760
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0569
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 321 0.113 Inparanoid score I2429
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D291809at33208
OrthoFinder 1 1.000 - - FOG0000120
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.800

Return to query results.
Submit another query.