DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sag and Arr1

DIOPT Version :10

Sequence 1:NP_037155.2 Gene:Sag / 25539 RGDID:3619 Length:403 Species:Rattus norvegicus
Sequence 2:NP_476681.1 Gene:Arr1 / 35078 FlyBaseID:FBgn0000120 Length:364 Species:Drosophila melanogaster


Alignment Length:357 Identity:157/357 - (43%)
Similarity:224/357 - (62%) Gaps:11/357 - (3%)


- Green bases have known domain annotations that are detailed below.


  Rat    13 IFKKVSRDKSVTIYLGKRDYIDHVSQVEPVDGVVLVDPELVK-GKKVYVTLTCAFRYGQEDIDVI 76
            :|||.|.:..:|:|:.:||::|.|:||||:||::::|.|.|: .:|::|.|.|.||||:||.::|
  Fly     7 VFKKCSPNNMITLYMNRRDFVDSVTQVEPIDGIIVLDDEYVRQNRKIFVQLVCNFRYGREDDEMI 71

  Rat    77 GLTFRRDLYFSRVQVYPPVGAMSAPTQLQLSLLKKLGDNTYPFLLTFPDYLPCSVMLQPAPQDVG 141
            ||.|:::|.....||.||.......|::|..||||||.|.|||::..|...|.||:||....|..
  Fly    72 GLRFQKELTLVSQQVCPPQKQDIQLTKMQERLLKKLGSNAYPFVMQMPPSSPASVVLQQKASDES 136

  Rat   142 KSCGVDFEVKAFATDITDAEEDKIPKKSSVRLLIRKVQHAPPEMGPQPCAEASWQFFMSDKPLHL 206
            :.|||.:.||.|.   .|::.|:..::|::.|.|||||:||.:.|.|||......|.:|...|.|
  Fly   137 QPCGVQYFVKIFT---GDSDCDRSHRRSTINLGIRKVQYAPTKQGIQPCTVVRKDFLLSPGELEL 198

  Rat   207 SVSLSKEIYFHGEPIPVTVTVTNNTEKVVKKIKVSVEQIANVVLYSSDYYVKPVASEETQE--KV 269
            .|:|.|::|.|||.|.|.:.|.||:.|||||||..|:|..:|||:.:..:...:|..||.|  .:
  Fly   199 EVTLDKQLYHHGEKISVNICVRNNSNKVVKKIKAMVQQGVDVVLFQNGQFRNTIAFMETSEGCPL 263

  Rat   270 QPNSTLTKTLVLVPLLANNRERRGIALDGKIKHEDTNLASSTIIKEGIDRTVMGILVSYHIKVKL 334
            .|.|:|.|.:.|||.|..|.:|.|||::|.||.:||.|||:|:|.....|...||:|||.:||||
  Fly   264 NPGSSLQKVMYLVPTLVANCDRAGIAVEGDIKRKDTALASTTLIASQDARDAFGIIVSYAVKVKL 328

  Rat   335 TVSGFLGELTSSEVATEVPFRLMHPQPEDPAK 366
                |||.| ..|:..|:||.||||:|...|:
  Fly   329 ----FLGAL-GGELCAELPFILMHPKPSRKAQ 355

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SagNP_037155.2 Arrestin_N 23..181 CDD:451447 68/158 (43%)
Arrestin_C 200..361 CDD:214976 76/162 (47%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 381..403
Arr1NP_476681.1 Arrestin_N 17..173 CDD:451447 68/158 (43%)
Arrestin_C 192..350 CDD:214976 76/162 (47%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.