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Protein Alignment Prkg2 and for

DIOPT Version :9

Sequence 1:	NP_037144.1	Gene:	Prkg2 / 25523	RGDID:	3401	Length:	762	Species:	Rattus norvegicus
Sequence 2:	NP_477487.1	Gene:	for / 44817	FlyBaseID:	FBgn0000721	Length:	1088	Species:	Drosophila melanogaster

Alignment Length:	759	Identity:	348/759 - (45%)
Similarity:	481/759 - (63%)	Gaps:	86/759 - (11%)

- Green bases have known domain annotations that are detailed below.

  Rat    24 EALRSKVAELEREVKRKDAELQEREYHLKELREQLAKQTVAIAELTEELQSKCIQLNKLQDVIHV 88
            :|...|:.|::|.::.||.|:.|.:.|                            |:|.|.|...
  Fly   396 QAKELKIQEMQRALQFKDNEIAELKSH----------------------------LDKFQSVFPF 432

  Rat    89 QGGSPL----------------QASPDKVPLDVHRKTSGLVSLHSRRGAKAGVSAEPTSRTYDLN 137
            ..||..                ..|.........||:    ..:.:|....|:||||.|.:..|.
  Fly   433 SRGSAAGCAGTGGASGSGAGGSGGSGPGTATGATRKS----GQNFQRQRALGISAEPQSESSLLL 493

  Rat   138 KPPEFSFEKARVRKDSSEKKLITDALNKNQFLKRLDPQQIKDMVECMYGRNYQQGSYIVKQGEPG 202
            :  ..||.|  ..||...::||..|:..|.|:|.||..||:::|:|||...|...:.|:|:|:.|
  Fly   494 E--HVSFPK--YDKDERSRELIKAAILDNDFMKNLDLTQIREIVDCMYPVKYPAKNLIIKEGDVG 554

  Rat   203 NHIFVLAEGRLEVFQGEKLLSSIPMWTTFGELAILYNCTRTASVKAITNVKTWALDREVFQNIMR 267
            :.::|:.:||:||.:..|.||::......|||||||||.|||::.|||....||::|:.||.||.
  Fly   555 SIVYVMEDGRVEVSREGKYLSTLSGAKVLGELAILYNCQRTATITAITECNLWAIERQCFQTIMM 619

  Rat   268 RTAQARDEEYRNFLRSVSLLKNLPEDKLTKIIDCLEVEYYDKGDYIIREGEEGSTFFILAKGKVK 332
            ||...|..||.:||:||.:.|:|.||.|.||.|.||..:|.:||||:|:|..|.||||::||||:
  Fly   620 RTGLIRQAEYSDFLKSVPIFKDLAEDTLIKISDVLEETHYQRGDYIVRQGARGDTFFIISKGKVR 684

  Rat   333 VTQSTEGHDQPQLIKTLQKGEYFGEKALISDDVRSANIIAEEND-VACLVIDRETFNQTVGTFDE 396
            ||...:...:.:.|:.|.||::||||||..||:|:||||.|..| |:|||||||||||.:...||
  Fly   685 VTIKQQDTQEEKFIRMLGKGDFFGEKALQGDDLRTANIICESADGVSCLVIDRETFNQLISNLDE 749

  Rat   397 LQ-KYLEGYVATLNRDDEKRHAKRSMSSWKLSKALSLEMIQLKEKVARFSSTSPFQNLEIIATLG 460
            :: :|          |||.                ::|..::.|:....:.|    :|.:|||||
  Fly   750 IKHRY----------DDEG----------------AMERRKINEEFRDINLT----DLRVIATLG 784

  Rat   461 VGGFGRVELVKVKNENI-AFAMKCIRKKHIVDTKQQEHVYSEKRILEELCSPFIVKLYRTFKDNK 524
            ||||||||||:...::. :||:|.::|..||:|:||:|:.|||.|:.|....|||||::||||.|
  Fly   785 VGGFGRVELVQTNGDSSRSFALKQMKKSQIVETRQQQHIMSEKEIMGEANCQFIVKLFKTFKDKK 849

  Rat   525 YVYMLLEACLGGELWSILRDRGSFDEPTSKFCVACVTEAFDYLHRLGIIYRDLKPENLILDADGY 589
            |:|||:|:|||||||:||||:|:||:.|::|..|||.|||||||...|||||||||||:|:..||
  Fly   850 YLYMLMESCLGGELWTILRDKGNFDDSTTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLNERGY 914

  Rat   590 LKLVDFGFAKKIGSGQKTWTFCGTPEYVAPEVILNKGHDFSVDFWSLGILVYELLTGNPPFSGID 654
            :||||||||||:.:|:|||||||||||||||||||:|||.|.|:||||:|::|||||.|||:|.|
  Fly   915 VKLVDFGFAKKLQTGRKTWTFCGTPEYVAPEVILNRGHDISADYWSLGVLMFELLTGTPPFTGSD 979

  Rat   655 QMMTYNLILKGIEKMDFPRKITRRPEDLIRRLCRQNPTERLGNLKNGINDIKKHRWLNGFNWEGL 719
            .|.|||:|||||:.::|||.|||...:||::|||.||.||||..:.||::|:||:|.:||.|.||
  Fly   980 PMRTYNIILKGIDAIEFPRNITRNASNLIKKLCRDNPAERLGYQRGGISEIQKHKWFDGFYWWGL 1044

  Rat   720 KARSLPSPLRRELSGPIDHSYFDKYPPE-KGVPPDEMSGWDKDF 762
            :..:|..|::..:...:|.:.||.|||: :|.|||:::||||||
  Fly  1045 QNCTLEPPIKPAVKSVVDTTNFDDYPPDPEGPPPDDVTGWDKDF 1088

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.