DRSC/TRiP Functional Genomics Resources

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Protein Alignment GABPA and Ets65A

DIOPT Version :9

Sequence 1:NP_001184226.1 Gene:GABPA / 2551 HGNCID:4071 Length:454 Species:Homo sapiens
Sequence 2:NP_001303373.1 Gene:Ets65A / 38700 FlyBaseID:FBgn0005658 Length:728 Species:Drosophila melanogaster


Alignment Length:86 Identity:54/86 - (62%)
Similarity:69/86 - (80%) Gaps:0/86 - (0%)


- Green bases have known domain annotations that are detailed below.


Human   314 TGNNGQIQLWQFLLELLTDKDARDCISWVGDEGEFKLNQPELVAQKWGQRKNKPTMNYEKLSRAL 378
            :..:|||||||||||||:|.:...||:|.|..|||||..|:.||::||:||:||.|||:||||||
  Fly   311 SSGSGQIQLWQFLLELLSDSNNASCITWEGTNGEFKLTDPDEVARRWGERKSKPNMNYDKLSRAL 375

Human   379 RYYYDGDMICKVQGKRFVYKF 399
            |||||.:::.||.|||:.|||
  Fly   376 RYYYDKNIMTKVHGKRYAYKF 396

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GABPANP_001184226.1 GABP-alpha 40..119 CDD:402975
SAM_PNT-GABP-alpha 168..254 CDD:176084
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 297..316 0/1 (0%)
ETS 319..403 CDD:197710 53/81 (65%)
Ets65ANP_001303373.1 ETS 316..401 CDD:197710 53/81 (65%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3806
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.810

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