DRSC/TRiP Functional Genomics Resources

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Protein Alignment Myo9b and ck

DIOPT Version :9

Sequence 1:XP_038950134.1 Gene:Myo9b / 25486 RGDID:3146 Length:2156 Species:Rattus norvegicus
Sequence 2:NP_001285949.1 Gene:ck / 34882 FlyBaseID:FBgn0000317 Length:2167 Species:Drosophila melanogaster


Alignment Length:2265 Identity:538/2265 - (23%)
Similarity:837/2265 - (36%) Gaps:786/2265 - (34%)


- Green bases have known domain annotations that are detailed below.


  Rat   109 LQERNADGSIQYL--HVQLLAQPTAACRLVERGLLPRPQADFDDLCNLPELNEANLLQSLKLRFV 171
            :|.|:.||...:|  ..::.|...::.:.||            |:.:|.:|:||.:|::|.:|:.
  Fly    36 IQVRDDDGDEVWLAPERRIKAMHASSVQGVE------------DMISLGDLHEAGILRNLLIRYK 88

  Rat   172 QQKIYTYAGSILVAINPFKFLPIYNPKYVKMYENQQLGKLEPHVFALADVAYYTMLRKHVNQCIV 236
            :..||||.||||||:||::.||||....:|:|:.:::|:|.||:||:.|.||..|.|...:||||
  Fly    89 ENLIYTYTGSILVAVNPYQILPIYTGDQIKLYKERKIGELPPHIFAIGDNAYAHMKRYRQDQCIV 153

  Rat   237 ISGESGSGKTQSTNFLIHCLTALSQKGYASGVERTILGAGPVLEAFGNAKTAHNNNSSRFGKFIQ 301
            ||||||:|||:||..::..|.|:|  |..|.:|:.||.|.|:|||||||||..|:|||||||:|.
  Fly   154 ISGESGAGKTESTKLILQYLAAIS--GKHSWIEQQILEANPILEAFGNAKTIRNDNSSRFGKYID 216

  Rat   302 VNYLESGIVRGAVVEKYLLEKSRLVSQEKDERNYHVFYYLLLGVSEEERQEFQLKQPQDYFYLNQ 366
            :::..:|::.||.:|:|||||||:|||...||||||||.:|.|:|.:|:....|....||.||..
  Fly   217 IHFSANGVIEGAKIEQYLLEKSRIVSQNHSERNYHVFYCILAGLSADEKSRLDLGMAADYKYLTG 281

  Rat   367 HNLNIEDGEDLKHDFERLQQAMEMVGFLPATKKQIFSVLSAILYLGNVTYKKRATGRDEGLEVGP 431
            .|....:|.|...:|..::.||:::.|......:|..:|:|:|:.||:.||.......:..|:..
  Fly   282 GNSITCEGRDDAAEFSDIRSAMKVLLFSDQEIWEIIKLLAALLHCGNIKYKATVVDNLDATEIPE 346

  Rat   432 PEVLDTLSQLLKVKRETLVEVLTKRKTITVNDKLILPYSLSEAITARDSMAKSLYSALFDWIVLR 496
            ...::.::.||.:..:.|::.||:|......:.::...|..:::..||:..|.:|..:|..||.:
  Fly   347 HINVERVAGLLGLPIQPLIDALTRRTLFAHGETVVSTLSRDQSVDVRDAFVKGIYGRMFVHIVRK 411

  Rat   497 INHALLNKKDMEEAVSCLSIGVLDIFGFEDFERNSFEQFCINYANEQLQYYFTQHIFKLEQEEYQ 561
            ||.|:...:    ..|..:||||||||||:|::|||||||||||||.||.:|.|||||||||||.
  Fly   412 INTAIFKPR----GTSRNAIGVLDIFGFENFDQNSFEQFCINYANENLQQFFVQHIFKLEQEEYN 472

  Rat   562 GEGISWHNIDYTDNVGCIHLISKKPTGLFYLLDEESNFPHATSHTLLAKFKQQHEDNKYFLGTPV 626
            .|.|:|.:|::.||...:.||:.|...:..|:|||:.||..|..|:|||..:.|..:|.:|....
  Fly   473 HEAINWQHIEFVDNQDALDLIAIKQLNIMALIDEEARFPKGTDQTMLAKLHKTHGSHKNYLKPKS 537

  Rat   627 -LEPAFIIQHFAGRVKYQIKDFREKNMDYMRPDIVALLRGSDSSYVRQLIGMDPVAVFRWAVLRA 690
             :..:|.:.||||.|.|..:.|.:||.|...||::.|:..|.:.::||:...|            
  Fly   538 DINTSFGLNHFAGVVFYDTRGFLDKNRDTFSPDLLHLVSQSTNKFLRQIFAQD------------ 590

  Rat   691 AIRAMAVLREAGRLRAERAEKAEAGVSSPVTRSHVEELPRGANTPSEKLYRCAGLDFSFERSEEL 755
                                                 :..||.|                     
  Fly   591 -------------------------------------IEMGAET--------------------- 597

  Rat   756 DVNAFEDIMAFYESRKVRERSDLHNQIIKSLKGLPWQGEDPRRLLQSLSRLQKPRTFFLKSKGIK 820
                                                                             
  Fly   598 ----------------------------------------------------------------- 597

  Rat   821 QKQIIPKNLLDSKSLRLIISMTLHDRTTKSLLHLHKKKKPPSISAQFQTSLNKLLEALGKAEPFF 885
                                                :|:.|::|.||:.||:.|::.|...:|||
  Fly   598 ------------------------------------RKRTPTLSTQFRKSLDALMKTLSSCQPFF 626

  Rat   886 IRCIRSNAEKKELCFDDELVLQQLRYTGMLETVRIRRSGYSAKYTFQDFTEQFQVLLP------- 943
            ||||:.|..||.:.||..|..:||||:||:||:||||:||..::.|::|.|:::.|:|       
  Fly   627 IRCIKPNELKKPMMFDRGLCCRQLRYSGMMETIRIRRAGYPIRHGFREFVERYRFLIPGVPPAHR 691

  Rat   944 KDVQPCREAIAALLEKLQVDRQNYQIGKTKVFLKETERQALQERLHGEVLRRILLLQSWFRMVLE 1008
            .|.|.....|.|::    :.:.:||:|.||||||:.....|::.....:.|:||:||...|..:.
  Fly   692 TDCQAATSRICAVV----LGKSDYQLGHTKVFLKDAHDLFLEQERDRVLTRKILILQRSIRGWVY 752

  Rat  1009 RRHFVQMKHAALTIQACWRSYRVRRTLERTRAA------------------------VYLQAAWR 1049
            ||.|::::.||:|:|..|:.|..|:.....|..                        |.|||..|
  Fly   753 RRRFLRLRAAAITVQRFWKGYAQRKRYRNMRVGYMRLQALIRSRVLSHRFRHLRGHIVGLQAHAR 817

  Rat  1050 GYLQRQAYHHQRHSIIRLQSLCRGHLQRRSFSQMMLE-KQKAE--QARETAGAEMSEGEPSPVAA 1111
            |||.|:.|.|:..::|::||..|..:..|.:.::.|| ||.||  |.|:                
  Fly   818 GYLVRREYGHKMWAVIKIQSHVRRMIAMRRYRKLRLEHKQFAEVLQLRK---------------- 866

  Rat  1112 GEQPSEHPVEDPESLGVETETWMNSKSPNGLSPKKEIPSPEMETPAQKTVPAESHEKVPSSREKR 1176
                    :|:.|.|            ..|....:||        |::......||     .|:|
  Fly   867 --------LEEQELL------------HRGNKHAREI--------AEQHYRDRLHE-----LERR 898

  Rat  1177 ESRRQRGLEHVERQNKHIQSCREENSTLREPSRKASLETGESFPEDTKEPREDGLETWTETAAPS 1241
            |.:.|  ||:..|...::       :.:.:.:||            .:||.:||           
  Fly   899 EIQEQ--LENRRRVEVNM-------NIINDAARK------------QEEPVDDG----------- 931

  Rat  1242 CPKQVPIVGDPPRSPSPLQRPASLDLDSRVSPVLPSSSLESPQDEDKGENSTKVQDKPESPSGST 1306
              |.|..:.|                      .||.||.::|.... |..::...|.|.:     
  Fly   932 --KLVEAMFD----------------------FLPDSSSDAPTPHG-GRETSVFNDLPHA----- 966

  Rat  1307 QIQRYQHPDTERLATAVEIWRGKKLASAMLSQSLDLSEKPRTAGAALTPTEERRISFSTSDVSKL 1371
                 |:.:.:.:...:.|                                       :.|...|
  Fly   967 -----QNVNQDDIIAPIHI---------------------------------------SEDEEDL 987

  Rat  1372 SPVKVQ--TSTEVDGDLS---AKKPAGHKKKSEDPSAGPDAGLPTGSQGDSKSAFKRLFLHKAKD 1431
            |..|.|  .:|...|:::   |||...|..            ||..:|||..:|           
  Fly   988 SEFKFQKFAATYFQGNVNHQYAKKALKHPL------------LPLHTQGDQLAA----------- 1029

  Rat  1432 KKPSLEGVEETEGSGGQAAQEAPARKTLDVPSSQQHRHTTGEKPLKGKKNRNRKVGQITVSEKWR 1496
                            ||......|.|.|:|..:.|                      |:.....
  Fly  1030 ----------------QALWITILRFTGDMPEPKYH----------------------TMDRMDT 1056

  Rat  1497 ESVFRKITNANELKFL---------------DEFLLNKVNDLRSQKTPIESLFIEATERFRSNIK 1546
            .||..|:|......|:               |.||..|...:|.:   :.||.::...:...:::
  Fly  1057 TSVMSKVTATLGRNFIRSKEFQEAQLMGLDPDAFLKQKPRSIRHK---LVSLTLKRKNKLGEDVR 1118

  Rat  1547 TMYSVPNGKIHVGYKDLMENYQIVVSNLAAERGEKDTNLVLNVFQSLLDEFTRSYNKTDFEPVKQ 1611
                                           |..:|.....:.:||.|                |
  Fly  1119 -------------------------------RRLQDDEYTADSYQSWL----------------Q 1136

  Rat  1612 GKAQKKKRKQERAVQEHNGHVFASYQVNIPQSCEQCLSYI-----------WLMDKALLCSVCKM 1665
            .:......|....:    ||.....::.....|:.|....           |     :|.|:|  
  Fly  1137 SRPTSNLEKLHFII----GHGILRAELRDEIYCQICKQLTNNPLKSSHARGW-----ILLSLC-- 1190

  Rat  1666 TCHKKCVHKIQSYCSYTGRRKSELGAEPGHFGVCVD------------------SLTSDKASVPI 1712
               ..|....:.:.:|.  |.......||:...|.:                  .|.:.|:..||
  Fly  1191 ---VGCFAPSEKFVNYL--RAFIREGPPGYAPYCEERLKRTFNNGTRNQPPSWLELQATKSKKPI 1250

  Rat  1713 VL------------------------EKLLEHVEMHGLYTEGLY--------------------- 1732
            :|                        .:|.:.:.:...:...||                     
  Fly  1251 MLPITFMDGNTKTLLADSATTARELCNQLSDKISLKDQFGFSLYIALFDKVSSLGSGGDHVMDAI 1315

  Rat  1733 -------RKSGAANRTRELRQALQTDPATVKLEDFPIHAITGVLKQWLRELPEPLMTFAQYGDFL 1790
                   ::.||..|....|...:.:                :...|.....:.:.|...|...:
  Fly  1316 SQCEQYAKEQGAQERNAPWRLFFRKE----------------IFAPWHEPTHDQVATNLIYQQVV 1364

  Rat  1791 RAVELPE----KQEQLAAIYAVLDHLPEANHTSLERLIFHLVKVALLEDVNRMSPGALAIIFAPC 1851
            |.|:..|    |:|.||.|.|....:..:...|:|||.      .||.:            |.|.
  Fly  1365 RGVKFGEYRCDKEEDLAMIAAQQYFIEYSTDMSMERLF------TLLPN------------FIPD 1411

  Rat  1852 LLRCPDNSDPLTSMKDVLKITTCVEMLIKEQMRKYKVKMEEINHLEAAESIAFRRLSLLRQNAPW 1916
            .  |....|.        .|.....::::...:.|.|| ::|..|:..|.|    :|..:..  |
  Fly  1412 F--CLSGVDK--------AIERWAALVLQAYKKSYYVK-DKIAPLKIKEDI----VSYAKYK--W 1459

  Rat  1917 PLKLGFSSPYEGVRTKSPRTP--------------VVQDLEEL---GALPEEAAGGDEDREKEIL 1964
            ||.  ||..||..|...|..|              ||.|.|::   .:.||..|...:...|...
  Fly  1460 PLL--FSRFYEAYRNSGPNLPKNDVIIAVNWTGVYVVDDQEQVLLELSFPEITAVSSQKTNKVFT 1522

  Rat  1965 ME-RIQSIKEEK--------EDI----TYRLPELDPRG------------SDEENLDS------- 1997
            .. .:.:::.|:        |||    .|.|..|..|.            ||..:..|       
  Fly  1523 QTFSLSTVRGEEFTFQSPNAEDIRDLVVYFLDGLKKRSKYVIALQDYRAPSDGTSFLSFFKGDLI 1587

  Rat  1998 --ETSASTESLLEE-----RAVRGAAEGP-PAPALPCPISPTPNPLPAATAPPR----------- 2043
              |..:..||:|..     |..|....|. ||        .|...||..:.||:           
  Fly  1588 ILEDESCGESVLNNGWCIGRCDRSQERGDFPA--------ETVYVLPTLSKPPQDILALFNIEEA 1644

  Rat  2044 --GRPTSFVT-VRVKTPRRTP--IMPMA--NIKLPP----GLPLHLTS------W--------AP 2083
              ||..|..: .....||..|  :|..|  :.:|||    ...|.|:|      |        ||
  Fly  1645 HHGRRLSMASNGGAVEPRDRPHTLMEYALDHFRLPPKRTMSKTLTLSSKRSEELWRYSRDPIKAP 1709

  Rat  2084 ALQEAAVPVKRREPPARRQDQVHSVYIAPGADLPSQGTL-----------GPLDH 2127
            .|::    ::.:|..|.......:..:....||||:...           |||.|
  Fly  1710 LLRK----LQSKEEFAEEACFAFAAILKYMGDLPSKRPRMGNEITDHIFDGPLKH 1760

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Myo9bXP_038950134.1 Ubiquitin_like_fold 16..112 CDD:421700 1/2 (50%)
MYSc_Myo9 160..977 CDD:276836 275/824 (33%)
IQ 1014..1033 CDD:197470 6/18 (33%)
IQ 1036..1058 CDD:197470 10/45 (22%)
PTZ00449 <1145..1493 CDD:185628 56/352 (16%)
C1_Myosin-IXb 1626..1683 CDD:410434 10/67 (15%)
RhoGAP 1696..1881 CDD:413382 36/258 (14%)
MCP_Sipho 1941..>2064 CDD:411416 37/181 (20%)
ckNP_001285949.1 MYSc 64..733 CDD:214580 284/861 (33%)
MYSc_Myo7 77..721 CDD:276832 275/824 (33%)
MyTH4 <1138..1245 CDD:214535 16/122 (13%)
B41 1251..1467 CDD:214604 44/268 (16%)
FERM_B-lobe 1355..1439 CDD:271216 23/111 (21%)
FERM_C1_MyoVII 1461..1559 CDD:270019 23/99 (23%)
SH3 1560..1624 CDD:302595 13/71 (18%)
MyTH4 1701..1849 CDD:214535 13/64 (20%)
B41 1856..2068 CDD:214604
FERM_M 1966..2068 CDD:278785
FERM_C2_MyoVII 2064..2159 CDD:270020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG4229
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

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