DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Man2a1 and LManI

DIOPT Version :10

Sequence 1:NP_037111.2 Gene:Man2a1 / 25478 RGDID:3038 Length:1148 Species:Rattus norvegicus
Sequence 2:NP_609407.1 Gene:LManI / 34436 FlyBaseID:FBgn0032253 Length:950 Species:Drosophila melanogaster


Alignment Length:1089 Identity:277/1089 - (25%)
Similarity:452/1089 - (41%) Gaps:261/1089 - (23%)


- Green bases have known domain annotations that are detailed below.


  Rat   165 LQVFVVPHSHNDPGWLKTFNDYF---RDK-----TQYIFNNMVLKLKEDSSRKFIWSEISYLAKW 221
            :.|.:|||||:|.|||||.:.|:   ::|     .|||.:.:|.:|.:||||:||..|..:.|||
  Fly     2 INVHLVPHSHDDVGWLKTVDQYYYGSQNKIQHAGVQYILDTVVEELLKDSSRRFIQVETFFFAKW 66

  Rat   222 WDIIDNPKKEAVKSLLQNGQLEIVTGGWVMADEATTHYFALIDQLIEGHQWLEKNLG--VKPRSG 284
            :.......:.|||.|:..|:||...|.|.|.||||.||.:::||...|.::|:...|  .:|..|
  Fly    67 YSEQTETVQRAVKKLVAQGRLEFAGGAWSMNDEATVHYQSVVDQFNLGLRYLKDTFGDCGRPTVG 131

  Rat   285 WAIDPFGHSPTMTYLLKRAGFSHMLIQRVHYSVKKHFSLQKTLEFFWRQNWDLGSTTDILCHMMP 349
            |.|||||||..|..:..:..|:.....|:.|..||...|...:|..|:.:..| ..::|...|: 
  Fly   132 WQIDPFGHSREMASIFAQMAFNGEFFARMDYVDKKQRMLDLEMEMIWQSSESL-KNSNIFTGML- 194

  Rat   350 FYSYDIPHTCGPDPKICCQFDFKRLP---GGRYGCPWGVPPEAISPGNVQSRAQMLLDQYRKKSK 411
            :..|..|      |..|...:.:..|   |..|            ..||.:|....:|..:..||
  Fly   195 YNHYSAP------PGFCFDINCEDAPIIDGESY------------DNNVDARVSEFIDYVKNMSK 241

  Rat   412 LFRTKVLLAPLGDDFRFSEYTEWDLQYRNYEQLFSYMNSQPHL--KVKIQFGTLSDYFDALEKSV 474
            .:|:..::.|:||||   :|.:..:.::|.::|..|:|.:...  :|.:.:.|.|.|...|.:. 
  Fly   242 SYRSTHIMVPMGDDF---QYEDAAVNFKNMDKLIKYVNDRQSTGSQVNVFYSTPSCYLYELHQL- 302

  Rat   475 AAEKKGGQSVFPALSGDFFTYADRDDHYWSGYFTSRPFYKRMDRIMESRLRTAEILYHLALKQAQ 539
                   :..:|..:.|||.|:.....||:|||||||..||..|......:|.:.|..||.....
  Fly   303 -------KQTWPNKTEDFFPYSSDSHSYWTGYFTSRPTQKRFHRDGNHFFQTVKQLSVLANLSGT 360

  Rat   540 KYKINKFLSSPHYTTLTEARRNLGLFQHHDAITGTAKDWVVVDYGTRLFQSLNSLEKIIGDSAFL 604
            :|       |.....|::|   :|:.|||||:|||.|..|..||...||:::...|....|:   
  Fly   361 QY-------SEDLDNLSQA---MGIMQHHDAVTGTEKQAVASDYDRLLFKAIVGAENSARDA--- 412

  Rat   605 LILKDKKLYQSDPSKAFLEMDTKQSSQDSLPKKNIIQLSAQEPRYLVVYNPFEQERHSVVSVRVN 669
              |:......|...::.||::....:.......|:|         :.:.||........|.|...
  Fly   413 --LRSLTNLTSGEFESCLELNISVCAFTQDTANNVI---------VTLVNPLAHSSTQYVRVPAK 466

  Rat   670 SATVKVLSDLGKAVEVQVSAV-WKDM---RTTSQAAYEVAFLAHLPPLGLKVYKILESQSSSSHL 730
            :....|..:.|:.|..:|..| |:.:   ...:...:|:.|.|.:..:...:.::|.|.      
  Fly   467 NENYIVTDEKGREVFSEVVPVPWQVLALEHRPNDTQHELVFEASVDKIANFLIRVLPSP------ 525

  Rat   731 ADYFLYNNDGQAESGIFHMKNMVD---------SGDAITIENSFLTLGFDRS--GLME-KVRRKE 783
                               ||:.:         |.|.:|:|.|.:.|.||.:  ||.. |:....
  Fly   526 -------------------KNIAEDQVQFPVERSQDELTVETSLVKLTFDTTTGGLKTVKMNGFT 571

  Rat   784 DNKQQELKVQFLWYGTT--NKRDKSGAYLFLPDGQGQPYVSLRTPFVRVTRGRIYSDVTCFLEHV 846
            :|.||...:...:.|..  :|...||||:|.|                      |.|:    |.|
  Fly   572 ENIQQTFGIYKGYRGNNGESKNRSSGAYVFRP----------------------YGDI----EIV 610

  Rat   847 THKVRLYHIQGIEGQSME------VSNIVDIRSVHNR------------------EIVMRISSKI 887
            .:||.|....|.:.:.:.      :|.::.|....||                  ||:.|.||.|
  Fly   611 NNKVELSFYNGTKVKEVHQHVNEWISQVIRIYEDVNRVEFEWLVGPIPTDDDVGKEIITRFSSNI 675

  Rat   888 NNQNRYYTDLNGYQIQPRR---------TMAKLPLQANVYPMSTMAYIQDAAHRLTLLSAQSLGA 943
            :::.::|||.||.:|..|.         .|:: .:..|.||::....:||...|:|||:.::.|.
  Fly   676 SSKGKFYTDSNGREILERERNQREHFTPDMSE-AISGNYYPVTGQISLQDDEKRITLLNDRAQGG 739

  Rat   944 SSMASGQIEVFMDRRLMQDDNRGLGQGVHDNKITANLFR-----ILLEKRNGMNMEEDKKSPVSY 1003
            :|:..|::|:.:.|||:.||..|:|:.:::.:....|..     ::|:..:|...:.        
  Fly   740 TSLKDGELELMLHRRLLNDDAFGVGEALNETQYGTGLIARGKIYLILDAVDGKPNQR-------- 796

  Rat  1004 PSLLSHMTS-------------AFLNHPFLPMVLSGQLPSPAIELL-----SEFRLLQSSLPCDI 1050
              ||.|...             |.:|...:|....  :|. ::|||     |:.::|       |
  Fly   797 --LLQHQLDQHFWKFFSKSNGVASVNRNMIPDFFG--IPE-SVELLSLEPYSKDQIL-------I 849

  Rat  1051 HLVNLRTIQSKVG----------KGYSDEAALILHRKVFDCQLSSRAMGLPCSTTQGKMSIP--K 1103
            .|.|..|..:.|.          .||          ::::            :|..|.|.:.  |
  Fly   850 RLENFNTEGNVVSFNIYPLFESLDGY----------QIWE------------TTLDGNMLLEDVK 892

  Rat  1104 LFNNFAVE--SFIPSSLSLMHSP--PDAQNTS------EVSLSPMEIST 1142
            .| .||.:  ..||||:...|:|  |...|::      .|:|.||:|.|
  Fly   893 RF-KFAQDGTGSIPSSVEYYHAPHNPLTANSTMNASGFVVTLVPMQIRT 940

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Man2a1NP_037111.2 PLN02701 127..1148 CDD:178304 277/1089 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1121..1148 10/30 (33%)
LManINP_609407.1 GH38N_AMII_LAM_like 2..276 CDD:212121 95/296 (32%)
PLN02701 4..765 CDD:178304 233/867 (27%)

Return to query results.
Submit another query.