DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Kcnj8 and Irk3

DIOPT Version :9

Sequence 1:	NP_058795.3	Gene:	Kcnj8 / 25472	RGDID:	2960	Length:	424	Species:	Rattus norvegicus
Sequence 2:	NP_001137835.2	Gene:	Irk3 / 35131	FlyBaseID:	FBgn0032706	Length:	446	Species:	Drosophila melanogaster

Alignment Length:	322	Identity:	113/322 - (35%)
Similarity:	181/322 - (56%)	Gaps:	12/322 - (3%)

- Green bases have known domain annotations that are detailed below.

  Rat    35 RFIAKSGACNLAHKNIREQG-RFLQDIFTTLVDLKWRHTLVIFTMSFLCSWLLFAIMWWLVAFAH 98
            |.:.|:|..|:..:.|.|:. |:::|:.|||::|:|::.|.:|..|:..||||||.:.::||::|
  Fly   117 RVMEKNGKENVVFRRIPEKSWRYMRDLVTTLMELEWKYMLTLFLGSYFLSWLLFAALCYVVAYSH 181

  Rat    99 GDIYAYMEKGITEKSGLESAVCVTNVRSFTSAFLFSIEVQVTIGFGGRMMTEECPLAITVLILQN 163
            ||.......|.....|::.  |:..|.|:.:..::|:|.|.|:|||.:..:||||..|.:.::|.
  Fly   182 GDFIFDPVSGKRMGEGVDP--CIYGVHSWVAMIIYSVETQTTLGFGEKYASEECPETIFLFVMQM 244

  Rat   164 IVGLIINAVMLGCIFMKTAQAHRRAETLIFSRHAVIAVRNGKLCFMFRVGDLRKSMIISASVRIQ 228
            :...:|...|:..|:.|||:..|:...|.||..|||..|:|:||.:|||.|.|:...|.:.:|:.
  Fly   245 LSAALIEGCMVSVIYAKTARPARQLTKLKFSDKAVICYRDGRLCLLFRVCDPREQQSIESKIRVY 309

  Rat   229 VVKKTTTPEGEVVPIHQQDIPVDNPIESNNIFLVA-PLIICHVIDKRSPLYDISATDLVN-QDLE 291
            ::....|.|||.:..|     |:..:|.|...::. |.::|||||:.|||...:...|.| ...|
  Fly   310 IIVDKRTREGETIKSH-----VELKLEGNGEQIILWPDVVCHVIDETSPLSQFTTAKLFNAAQFE 369

  Rat   292 VIVILEGVVETTGITTQARTSYIAEEIQWGHRFVSIV--TEEEGVYSVDYSKFGNTVRVAAP 351
            :.|.:.|....|...|:|:|||:..||.||.|||:|:  ..:...|.|||..|..|:.|..|
  Fly   370 LYVSIVGTSPATAQMTEAKTSYLPREIFWGQRFVNIIHYDAQNERYIVDYENFNRTISVDMP 431

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Kcnj8	NP_058795.3	IRK	37..370	CDD:279361	112/320 (35%)
		Selectivity filter. /evidence=ECO:0000250	140..145		3/4 (75%)
		Disordered. /evidence=ECO:0000256\|SAM:MobiDB-lite	374..424
Irk3	NP_001137835.2	Ion_trans_2	119..432	CDD:304432	112/320 (35%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C166346794
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D289862at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR11767
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	5	4.950