DRSC/TRiP Functional Genomics Resources

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Protein Alignment paa1 and Pp2A-29B

DIOPT Version :9

Sequence 1:NP_594948.1 Gene:paa1 / 2543042 PomBaseID:SPAP8A3.09c Length:590 Species:Schizosaccharomyces pombe
Sequence 2:NP_001245944.1 Gene:Pp2A-29B / 2768940 FlyBaseID:FBgn0260439 Length:650 Species:Drosophila melanogaster


Alignment Length:588 Identity:310/588 - (52%)
Similarity:406/588 - (69%) Gaps:11/588 - (1%)


- Green bases have known domain annotations that are detailed below.


pombe     3 TENQVND-LYPIAVLIDELKHDEITYRLNALERLSTIALALGPERTRDELIPFLDESIDDEDEVL 66
            ::..|:| ||||||||||||::::..|||::::|||||||||.||||.||||||.|:|.||||||
  Fly     4 SDKSVDDSLYPIAVLIDELKNEDVQLRLNSIKKLSTIALALGEERTRSELIPFLTETIYDEDEVL 68

pombe    67 SALADQLGNFVDYVGGPEYAHVLLSPLENLAATEETVVRDKAVDSLNKVCICLSQEQLEQYFVPL 131
            .|||||||||...|||||:|..|:.|||:||..||||||||||:||..|....|.:.||.:.||.
  Fly    69 LALADQLGNFTSLVGGPEFAMYLIPPLESLATVEETVVRDKAVESLRTVAAEHSAQDLEIHVVPT 133

pombe   132 VQRLSTAEWFTSRASSAGLYCAAYSQSENPAVKVSLRQSFSHLCHDEAPMVRRPAATNCAKFVFL 196
            :|||.:.:|||||.|:.||:...|.:...| ||..||.:|..||.||.|||||.||....:|..:
  Fly   134 LQRLVSGDWFTSRTSACGLFSVCYPRVTQP-VKAELRANFRKLCQDETPMVRRAAANKLGEFAKV 197

pombe   197 VTKQEAIDEFIPLFNSLSNDDQDSVRLLSFDIMVSLAEVLKSDSEIRHYLLQPLRSFVSDSSWRT 261
            |..:....:.||.|..|:.|||||||||:.:..||:|::|..| ::.|.:|..||...||||||.
  Fly   198 VETEYLKSDLIPNFVQLAQDDQDSVRLLAVEACVSIAQLLPQD-DVEHLVLPTLRQCASDSSWRV 261

pombe   262 RYMVAANFVKLAKVVGPSLIKDELIKPFVLLMKDTEQEVRRAIATQIPGFCELLDK----RIVLE 322
            |||||..||.|.|.|||.:.:.:|:..|..|:||.|.|||.|:||::..||..|||    :|:|.
  Fly   262 RYMVAEKFVDLQKAVGPEITRVDLVPAFQYLLKDAEAEVRAAVATKVKDFCANLDKVNQVQIILS 326

pombe   323 EIIPVIQELINDPAQHVRAALGMNIGALAPQLGKEKTTEYLLPMFLELLKDENPEVRLNIISKLE 387
            .|:|.:::|::||..||::||...|..|:|.||..:|.|.|||:||..||||.|||||||||.|:
  Fly   327 SILPYVRDLVSDPNPHVKSALASVIMGLSPMLGAYQTVEQLLPLFLIQLKDECPEVRLNIISNLD 391

pombe   388 VVNKVVGIELLSQSLLPAIVTLAEDKQWRVRLAIIDYIPLLAQQLGVEFFNEKMGNLCMSWLEDH 452
            .||.|:||:.||||||||||.||||.:||||||||:|:|.||.|||.|||::|:..|||.||.||
  Fly   392 CVNDVIGIQQLSQSLLPAIVELAEDSKWRVRLAIIEYMPALAGQLGQEFFDQKLRGLCMGWLNDH 456

pombe   453 VYSIREAAIKNLRKLTEIFGLEWATETIIPKFLAMRSHPNYLYRMTTIFAISEIAPALNAEVIEK 517
            ||:|||||..|::||.|.||..||.:.|||..|.|..:.|||:|||.:|.::.:|.....::..|
  Fly   457 VYAIREAATLNMKKLVEQFGAPWAEQAIIPMILVMSRNKNYLHRMTCLFCLNVLAEVCGTDITTK 521

pombe   518 QILPTLEQLVNDPIPNIRFNVAKAFEVLKPVLAAGGDSTVYEQQIIPLLEQLTKDNDPDVQYFAT 582
            .:|||:..|..||:.|:||||||..:.:.|.|    :::|.:.|:.|.|::|..|.|.||::||.
  Fly   522 LLLPTVLLLAADPVANVRFNVAKTLQKISPFL----EASVIDAQVKPTLDKLNTDTDVDVKHFAA 582

pombe   583 QAL 585
            ||:
  Fly   583 QAI 585

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
paa1NP_594948.1 HEAT repeat 13..37 CDD:293787 13/23 (57%)
HEAT repeat 51..78 CDD:293787 22/26 (85%)
HEAT repeat 88..118 CDD:293787 19/29 (66%)
HEAT repeat 127..153 CDD:293787 13/25 (52%)
HEAT repeat 285..313 CDD:293787 13/27 (48%)
HEAT repeat 323..353 CDD:293787 11/29 (38%)
HEAT_2 326..422 CDD:290374 59/95 (62%)
HEAT repeat 362..388 CDD:293787 19/25 (76%)
HEAT repeat 399..428 CDD:293787 23/28 (82%)
HEAT repeat 440..466 CDD:293787 16/25 (64%)
ARM 447..545 CDD:237987 46/97 (47%)
HEAT repeat 477..506 CDD:293787 12/28 (43%)
HEAT_2 486..586 CDD:290374 38/100 (38%)
HEAT repeat 516..545 CDD:293787 14/28 (50%)
HEAT repeat 559..585 CDD:293787 11/25 (44%)
Pp2A-29BNP_001245944.1 HEAT_2 15..115 CDD:290374 71/99 (72%)
HEAT repeat 15..39 CDD:293787 13/23 (57%)
HEAT repeat 53..80 CDD:293787 22/26 (85%)
HEAT repeat 90..120 CDD:293787 19/29 (66%)
HEAT repeat 129..154 CDD:293787 13/24 (54%)
HEAT repeat 165..194 CDD:293787 15/28 (54%)
HEAT_2 175..267 CDD:290374 45/92 (49%)
HEAT_EZ 181..230 CDD:290247 22/48 (46%)
HEAT repeat 206..232 CDD:293787 13/25 (52%)
HEAT repeat 247..271 CDD:293787 15/23 (65%)
HEAT repeat 285..313 CDD:293787 13/27 (48%)
HEAT repeat 327..357 CDD:293787 11/29 (38%)
HEAT repeat 366..392 CDD:293787 19/25 (76%)
HEAT repeat 403..432 CDD:293787 23/28 (82%)
HEAT repeat 444..470 CDD:293787 16/25 (64%)
HEAT repeat 481..510 CDD:293787 12/28 (43%)
HEAT repeat 520..546 CDD:293787 14/25 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 188 1.000 Domainoid score I750
eggNOG 1 0.900 - - E1_KOG0211
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H68559
Inparanoid 1 1.050 586 1.000 Inparanoid score I166
OMA 1 1.010 - - QHG54034
OrthoFinder 1 1.000 - - FOG0001701
OrthoInspector 1 1.000 - - oto101894
orthoMCL 1 0.900 - - OOG6_101100
Panther 1 1.100 - - LDO PTHR10648
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1
SonicParanoid 1 1.000 - - X1096
TreeFam 1 0.960 - -
1413.860

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