DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ctse and CG6508

DIOPT Version :9

Sequence 1:XP_006249810.1 Gene:Ctse / 25424 RGDID:2446 Length:398 Species:Rattus norvegicus
Sequence 2:NP_609457.1 Gene:CG6508 / 34493 FlyBaseID:FBgn0032303 Length:423 Species:Drosophila melanogaster


Alignment Length:395 Identity:163/395 - (41%)
Similarity:233/395 - (58%) Gaps:19/395 - (4%)


- Green bases have known domain annotations that are detailed below.


  Rat     4 LFVLLLLLLLLDLAQAQGVLHRVPLRRHQSLRKKLRAQGQLSDFWRSHNLDMIEFSESCNVDKGI 68
            |.::.|.|||||  .:.|.|.|.|:.| |..:.|..|..:......:....:::...|     ..
  Fly     6 LIIIPLFLLLLD--HSMGQLRRTPITR-QINQNKTHANVKAEKILLAAKYFLVDRQSS-----QT 62

  Rat    69 NEPLINYLDMEYFGTVSIGSPSQNFTVIFDTGSSNLWVPSVYC--TSPACKAHPVFHPSQSSTYM 131
            .:.|.|..::||...:.||:|.|.|.:.||||||:||||||.|  |:.||:.|..::.|.||:::
  Fly    63 TQVLANGFNLEYTIRLCIGTPPQCFNLQFDTGSSDLWVPSVKCSSTNEACQKHNKYNSSASSSHV 127

  Rat   132 EVGNHFSIQYGTGSLTGIIGADQVSVEGLTVEGQQFGESVKEPGQTFVNAEFDGILGLGYPSLAV 196
            |.|..||||||:|||:|.:..|.|.::|:.:..|.|.|::.|||..|||..||||:|:.:.|:: 
  Fly   128 EDGKGFSIQYGSGSLSGFLSTDTVDIDGMVIRNQTFAEAIDEPGSAFVNTIFDGIIGMAFASIS- 191

  Rat   197 GGVTPVFDNMMAQNLVALPMFSVYLSSDPQGGSGSELTFGGYDPSHFSGSLNWIPVTKQGYWQIA 261
            ||||..|||::.|.||..|:|||||..|....||.|:.:||.|.|.:.|.:|::||:...|||..
  Fly   192 GGVTTPFDNIIRQGLVKHPVFSVYLRRDGTSQSGGEVIWGGIDRSIYRGCINYVPVSMPAYWQFT 256

  Rat   262 LDGIQVGDTVMFCSEGCQAIVDTGTSLITGPPKKIKQLQEAIGATPM-DGEYAVDCATLNMMPNV 325
            .:.::: :.::.|: |||||.|||||||..|.:..|.:.:.:.||.. |||..|||::|..:|||
  Fly   257 ANSVKI-EGILLCN-GCQAIADTGTSLIAVPLRAYKAINKVLNATDAGDGEAFVDCSSLCRLPNV 319

  Rat   326 TFLINGVSYTLSPTAYILPDLVDGMQ-FCGSGFQGLDIQPPAGPLWILGDVFIRKFYSVFDRGNN 389
            ...|.|.:|||:|..||.....|..| .|.|||..|.    ...||||||:|:.|.|:|||.|..
  Fly   320 NLNIGGTTYTLTPKDYIYKVQADNNQTLCLSGFTYLQ----GNLLWILGDIFLGKVYTVFDVGKE 380

  Rat   390 QVGLA 394
            ::|.|
  Fly   381 RIGFA 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CtseXP_006249810.1 A1_Propeptide 23..51 CDD:285240 7/27 (26%)
Asp 79..396 CDD:278455 145/320 (45%)
pepsin_retropepsin_like 80..395 CDD:299705 144/319 (45%)
CG6508NP_609457.1 pepsin_retropepsin_like 68..386 CDD:299705 146/325 (45%)
Asp 73..387 CDD:278455 145/320 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166344950
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1339
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54317
OrthoDB 1 1.010 - - D1619495at2759
OrthoFinder 1 1.000 - - FOG0000066
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR47966
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.860

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