DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment caf5 and CG33282

DIOPT Version :9

Sequence 1:NP_596314.1 Gene:caf5 / 2541116 PomBaseID:SPBC609.04 Length:531 Species:Schizosaccharomyces pombe
Sequence 2:NP_001097067.1 Gene:CG33282 / 2768939 FlyBaseID:FBgn0053282 Length:460 Species:Drosophila melanogaster


Alignment Length:514 Identity:94/514 - (18%)
Similarity:173/514 - (33%) Gaps:177/514 - (34%)


- Green bases have known domain annotations that are detailed below.


pombe    82 KLVVTFDICFLTFAVYVGSAIFTPGISEMQ----------ETMHVGTVPVVLGLTLFVLGYAIGP 136
            :|:.|..:..:||...||....:|.::::|          ....:..:..:|||...     .|.
  Fly    17 QLLATVIVNIITFGHGVGVGWLSPTLTKIQTADSPLDFEVNLAQISWLGSMLGLDSL-----CGN 76

pombe   137 LILSPLSEIPQVGRQKIYVLSLLVFVCLQIPTALGSSLGVLLPMRFLAGFFGSPALATGGATLAD 201
            |.::.|  |.:.||:....|....:.|:.|.....|::..|...|||.||       ||||... 
  Fly    77 LTIAML--IERAGRKFCLYLMAGPYACIWILIYCASNVYYLYAARFLCGF-------TGGAGYL- 131

pombe   202 IWQPWLLPYFMCFWA-----------------IGAIGGPVLGPLLGGAMVVAESWRWQFWLLMMI 249
                 ::|.|:...|                 :|.:.|.:|...|...:|.         .|.:|
  Fly   132 -----VVPIFISEVADSNIRGALTSMVMLSVDLGILAGYILSTYLAYHVVP---------FLAII 182

pombe   250 SGFALIVIFFFMPETSEWHILYKRAKRFRKITGNEN----YRTE--------AELASSHLSVAQL 302
            ...|..:....:|||:.:  |.|::    ::...||    ||.:        :::....|..|.|
  Fly   183 LPVAYFIANIMLPETAPY--LLKKS----QLAAAENSFRYYRNQRSAICEQTSKVNFEELRTAVL 241

pombe   303 AKET-----------IIRPIILSISEPIVLSLNIYIGLIYSILYLWFEAFPILFTSVYHFTIIEN 356
            :::|           ..:|.:...:..|||||    |..:|.::.:......:|.:......:..
  Fly   242 SQQTRNATPLSYKDLTTKPALKGFAASIVLSL----GYQFSGVFSFINYMSDIFKASGSVVDVNT 302

pombe   357 GLVYLGI--LVGALITLACYFVFLYKVMIPAFMASGGDFAPEGVLVISFPATFFIPICLFWFGWS 419
            ..:.:|:  :||.                                   :.:|..:.|.       
  Fly   303 ATIIIGLVQIVGV-----------------------------------YTSTILVDIV------- 325

pombe   420 GRESVHWIVPIVSTLFYASGAFLMFQSMFQYLAASYPK---------------YVASV-FAGNDL 468
            ||.    ::.::||:....|....  ..|.|||..|..               |||:: ..|  :
  Fly   326 GRR----VLMLISTMGVGIGCIAF--GCFTYLAKIYDLSDFNWLPLVLMIIICYVANIGLIG--I 382

pombe   469 FRSAMAASFPLFARAMFNNTGPSYAPVAWGSTILGIVACLMIP------IPFVLHKWGL 521
            |...:...||:..|::              :|.|.::...::.      .|.:||.||:
  Fly   383 FFLVLVELFPVKIRSL--------------ATSLSVIFLSLLVFGTLKLFPLMLHYWGI 427

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
caf5NP_596314.1 MFS_1 89..465 CDD:284993 80/443 (18%)
2_A_01_02 126..264 CDD:273318 32/154 (21%)
CG33282NP_001097067.1 MFS 21..448 CDD:119392 93/510 (18%)
MFS_1 53..409 CDD:284993 81/458 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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