DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cnga2 and CG42260

DIOPT Version :9

Sequence 1:NP_037060.2 Gene:Cnga2 / 25411 RGDID:2367 Length:664 Species:Rattus norvegicus
Sequence 2:NP_001356969.1 Gene:CG42260 / 37614 FlyBaseID:FBgn0259145 Length:1269 Species:Drosophila melanogaster


Alignment Length:483 Identity:229/483 - (47%)
Similarity:312/483 - (64%) Gaps:26/483 - (5%)


- Green bases have known domain annotations that are detailed below.


  Rat   111 HQGDDKGGKDGEGK--------------------GTKKKFELFVLDPAGDWYYRWLFVIAMPVLY 155
            |.|...||..|.|.                    .|..:...||.||||...|.|..|::|..||
  Fly   529 HGGAGSGGGSGPGSHGGQPHHQKPRRTASQRIRAATAARKLHFVFDPAGRLCYYWSMVVSMAFLY 593

  Rat   156 NWCLLVARACFSDLQRNYFVVWLVLDYFSDTVYIADLIIRLRTGFLEQGLLVKDPKKLRDNYIHT 220
            |:.:::.|..|.::.|....:|..|||.||.:|:.|::...|||:||.|:|..|..|||.:|:::
  Fly   594 NFWVIIYRFAFQEINRRTIAIWFCLDYLSDFLYLIDILFHFRTGYLEDGVLQTDALKLRTHYMNS 658

  Rat   221 LQFKLDVASIIPTDLIYFAVGIHSPEVRFNRLLHFARMFEFFDRTETRTSYPNIFRISNLVLYIL 285
            ..|.:|...::|.|.:|.::|.:| .:|..||:...|.:.|.||||..|:|||:||.:.|:.|:|
  Fly   659 TIFYIDCLCLLPLDFLYLSIGFNS-ILRSFRLVKIYRFWAFMDRTERHTNYPNLFRSTALIHYLL 722

  Rat   286 VIIHWNACIYYVISKSIGFGVDTWVYPNITDPEYGYLAREYIYCLYWSTLTLTTIGETPPPVKDE 350
            ||.|||.|:|::|.|:.|||...|||   .|.|...:.::|:...||.||.|||||:.|.|....
  Fly   723 VIFHWNGCLYHIIHKNNGFGSRNWVY---HDSESADVVKQYLQSYYWCTLALTTIGDLPKPRSKG 784

  Rat   351 EYLFVIFDFLIGVLIFATIVGNVGSMISNMNATRAEFQAKIDAVKHYMQFRKVSKDMEAKVIKWF 415
            ||:|||...|.|:::|||::|:|.:::::::|.|.|||||:|.||.||:.|:|...::.||||||
  Fly   785 EYVFVILQLLFGLMLFATVLGHVANIVTSVSAARKEFQAKLDGVKTYMRMRRVPNHLQVKVIKWF 849

  Rat   416 DYLWTNKKTVDEREVLKNLPAKLRAEIAINVHLSTLKKVRIFQDCEAGLLVELVLKLRPQVFSPG 480
            ||||..:|..||...:..||.||:|||||||||.|||:|.|||:.|||.|.||||:|||.:||||
  Fly   850 DYLWLTQKCSDEERAVSCLPDKLKAEIAINVHLDTLKRVEIFQNTEAGFLCELVLRLRPVLFSPG 914

  Rat   481 DYICRKGDIGKEMYIIKEGKLAVVADDGVTQYALLSAGSCFGEISILNIKGSKMGNRRTANIRSL 545
            |||||||::||||||:..|:|.||||:|.|..|.|.|||.||||||||:  ...||||||::||:
  Fly   915 DYICRKGEVGKEMYIVNRGRLQVVADNGKTVMASLKAGSYFGEISILNM--GTAGNRRTASVRSV 977

  Rat   546 GYSDLFCLSKDDLMEAVTEYPDAKKVLE 573
            ||||||.|||.|:.:.:.|||.|:..||
  Fly   978 GYSDLFVLSKKDMWDVLKEYPAARVRLE 1005

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cnga2NP_037060.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..51
Ion_trans 142..384 CDD:395416 97/241 (40%)
Radical_SAM 417..>470 CDD:418514 32/52 (62%)
CAP_ED 456..572 CDD:237999 74/115 (64%)
CLZ 572..639 CDD:406832 2/2 (100%)
CG42260NP_001356969.1 Ion_trans 581..819 CDD:334124 97/241 (40%)
CAP_ED 890..1004 CDD:237999 74/115 (64%)
DUF4655 1084..>1154 CDD:317882
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 124 1.000 Domainoid score I5370
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1073751at2759
OrthoFinder 1 1.000 - - FOG0000167
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100817
Panther 1 1.100 - - O PTHR45638
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.920

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