DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment BRWD3 and BDF1

DIOPT Version :10

Sequence 1:NP_694984.5 Gene:BRWD3 / 254065 HGNCID:17342 Length:1802 Species:Homo sapiens
Sequence 2:NP_013503.1 Gene:BDF1 / 851115 SGDID:S000004391 Length:686 Species:Saccharomyces cerevisiae


Alignment Length:661 Identity:140/661 - (21%)
Similarity:232/661 - (35%) Gaps:208/661 - (31%)


- Green bases have known domain annotations that are detailed below.


Human  1090 DNNEREKMSPWDM--EPIPEGTAFPDEVGAGVPVSQEELTALLYKPQEGEWGAHSRDEECERVIQ 1152
            |.|.:::: |.::  ||.|            .|..:.::..|...|.......|:        :.
Yeast   116 DENSKQEL-PMEVPKEPAP------------APPPEPDMNNLPQNPIPKHQQKHA--------LL 159

Human  1153 GINHLLSLDFASPFAVPVD--LSAYPLYCTVVAYPTDLNTIRRRLENRFYRRISALMWEVRYIEH 1215
            .|..:..|..|.||..|||  ....|.|...:..|.||:||.|:|....|.....:..:...:.:
Yeast   160 AIKAVKRLKDARPFLQPVDPVKLDIPFYFNYIKRPMDLSTIERKLNVGAYEVPEQITEDFNLMVN 224

Human  1216 NARTFNEPDSPIVKAAKIVTDVLLRFIGDQSCTDILDTYNKIKAEERNSTDAEEDTEIVDLDSDG 1280
            |:..||.|::.|.:.|:.:.....:.:.:....|.    ..:.|:.|.|: |:||..||...:. 
Yeast   225 NSIKFNGPNAGISQMARNIQASFEKHMLNMPAKDA----PPVIAKGRRSS-AQEDAPIVIRRAQ- 283

Human  1281 PGTSSGR-------------------KVKCRGRRQSLKCNPDAWKKQCKELLSLIYEREDSE--- 1323
              |.:||                   |.|.:..:|::|.        |:.:|..:..::.:.   
Yeast   284 --THNGRPKRTIHPPKSKDIYPYESKKPKSKRLQQAMKF--------CQSVLKELMAKKHASYNY 338

Human  1324 PFRQPADLLSYPGHQEQEGESSESVVPERQQDSSLSEDYQDVIDTPVDFSTVKETLEAGNYGSPL 1388
            ||.:|.|.:|..             :|          .|.|.:..|:|..|:.:.|....|.:..
Yeast   339 PFLEPVDPVSMN-------------LP----------TYFDYVKEPMDLGTIAKKLNDWQYQTME 380

Human  1389 EFYKDVRQIFNNSKAYTSNKKSRIYSMM-LRLSALF-----------------ESHIKNIISEYK 1435
            :|.:|||.:|.|  .||.|....|.:|| .||..:|                 :|..:....:|:
Yeast   381 DFERDVRLVFKN--CYTFNPDGTIVNMMGHRLEEVFNSKWADRPNLDDYDSDEDSRTQGDYDDYE 443

Human  1436 S---------------AIQ-----------------SQKRRRPRYRKRL-------------RSS 1455
            |               |||                 .|:..:.|..:||             ||.
Yeast   444 SEYSESDIDETIITNPAIQYLEEQLARMKVELQQLKKQELEKIRKERRLARGSKKRGKRSKGRSG 508

Human  1456 SSSLSSSGAPSPKGK--------QKQMKLQPKNDQNTS-----VSHARTSSPFSSPVSDAAEGLS 1507
            |.:.||.|....|.|        .|::..:..||..||     :...:.|.|..|. .|..| |.
Yeast   509 SKNASSKGRRDKKNKLKTVVTYDMKRIITERINDLPTSKLERAIDIIKKSMPNISE-DDEVE-LD 571

Human  1508 LYLLDDEPDGPFSSSSFGGY-SRSGNSHDPGKAKSFRNRVLPVKQDHSLDGPLTNGDGRE----- 1566
            |..||:.......::.|..| |.||.|                   :.|||  |:|..|:     
Yeast   572 LDTLDNHTILTLYNTFFRQYESSSGAS-------------------NGLDG--TSGVTRDASSLS 615

Human  1567 PRTGIKRKLLSASEEDENMGGEDKEKKETKEKSHLSTSES----------GELGSSLSSESTCGS 1621
            |.:...||..|.:     :..|::.::..|.|:.|:..:|          |::.|:..:..:..|
Yeast   616 PTSAGSRKRRSKA-----LSQEEQSRQIEKIKNKLAILDSASPLSQNGSPGQIQSAAHNGFSSSS 675

Human  1622 DSDSESTSRTD 1632
            |.|..|.|..:
Yeast   676 DDDVSSESEEE 686

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BRWD3NP_694984.5 WD 1 170..209
WD40 <178..496 CDD:441893
WD40 repeat 183..220 CDD:293791
WD 2 213..251
WD40 repeat 226..262 CDD:293791
WD 3 255..297
WD40 repeat 267..313 CDD:293791
WD 4 307..347
WD40 repeat 321..359 CDD:293791
WD 5 353..393
WD40 repeat 365..425 CDD:293791
WD 6 400..452
WD40 repeat 426..462 CDD:293791
WD 7 456..495
WD40 repeat 468..493 CDD:293791
WD 8 502..542
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 768..910
Bromo_WDR9_I_like 1130..1242 CDD:99958 26/113 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1262..1292 12/48 (25%)
Bromodomain 1301..1442 CDD:445827 36/193 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1326..1361 4/34 (12%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1438..1500 22/104 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1520..1725 28/129 (22%)
BDF1NP_013503.1 COG5076 1..373 CDD:227408 64/316 (20%)
Bromodomain <339..417 CDD:445827 28/102 (27%)
PTZ00108 <386..647 CDD:240271 65/290 (22%)
BET 527..589 CDD:435704 14/63 (22%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.