Sequence 1: | NP_595728.1 | Gene: | sce3 / 2540528 | PomBaseID: | SPBC18H10.04c | Length: | 388 | Species: | Schizosaccharomyces pombe |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001015319.1 | Gene: | eIF4B / 3355041 | FlyBaseID: | FBgn0020660 | Length: | 459 | Species: | Drosophila melanogaster |
Alignment Length: | 421 | Identity: | 115/421 - (27%) |
---|---|---|---|
Similarity: | 167/421 - (39%) | Gaps: | 113/421 - (26%) |
- Green bases have known domain annotations that are detailed below.
pombe 5 KSTKMSLNAFL--GDESFGSTNWADDIDDLPALPQDRTTSTYRATPSSADAGYNAPSSTFESVRS 67
pombe 68 PPESRREGGMGSGYQRDAIPIPSEPPFTAHVGNLSFDLTENDLGDFFGEGVTSIRLVI---DPLT 129
pombe 130 ERSRGFGYVEFETADTLSAALALSGEDLMGRPVRITVAEPRRSFAREE--------------RST 180
pombe 181 GDWVR----------------------RGPLPPAEPAESPFGKRRTNSGRFRDPARDPSDRVREE 223
pombe 224 PREWVRRGPLP-----PRESS-----ERPRLNLKPRSSSNVNTEATPSATTTTSSKPKRDP---- 274
pombe 275 ----------FGGAKPVDNTSVLQRVEEKLAKRTQSFRREDNANRERSTSRKPSADKAEKTDKTD 329
pombe 330 AIAEKVS-----DIRLGD------GEKKSSE 349 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
sce3 | NP_595728.1 | RRM | 1..255 | CDD:223796 | 85/300 (28%) |
RRM_SF | 95..169 | CDD:302621 | 32/76 (42%) | ||
eIF4B | NP_001015319.1 | RRM | <72..268 | CDD:223796 | 58/198 (29%) |
RRM_eIF4B | 79..155 | CDD:240848 | 34/76 (45%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 1 | 1.000 | 50 | 1.000 | Domainoid score | I3394 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 1 | 1.000 | - | - | oto102008 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_105219 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1292 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
6 | 5.840 |