DRSC/TRiP Functional Genomics Resources

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Protein Alignment Casp3 and Dcp-1

DIOPT Version :9

Sequence 1:NP_037054.1 Gene:Casp3 / 25402 RGDID:2275 Length:277 Species:Rattus norvegicus
Sequence 2:NP_476974.1 Gene:Dcp-1 / 37729 FlyBaseID:FBgn0010501 Length:323 Species:Drosophila melanogaster


Alignment Length:247 Identity:97/247 - (39%)
Similarity:144/247 - (58%) Gaps:8/247 - (3%)


- Green bases have known domain annotations that are detailed below.


  Rat    35 SSYKMDYPEMGLCIIINNKNFHKSTGMSARNGTDVDAANLRETFMALKYEVRNKNDLTREEIMEL 99
            |.|.|.:...|:.:|.|:: |.....:.:|.||:|||..|::.|..|.:.|....|....:|::.
  Fly    69 SEYNMSHKHRGVALIFNHE-FFDIPSLKSRTGTNVDAQELKKAFENLGFAVSVHKDCKLRDILKH 132

  Rat   100 MDSVSKEDHSKRSSFVCVILSHGDEGVIFGTNGPVDLKKLTSFFRGDYCRSLTGKPKLFIIQACR 164
            :...::.||:........|||||:.|.::..:....|..:..:|...:|.||.||||||.||||:
  Fly   133 VGKAAELDHTDNDCLAVAILSHGEHGYLYAKDTQYKLDNIWHYFTATFCPSLAGKPKLFFIQACQ 197

  Rat   165 GTELDCGIETDSG---TDDDMACQ-KIPVEADFLYAYSTAPGYYSWRNSRDGSWFIQSLCAMLKL 225
            |..||.||..:.|   ||.:.:.. |||:.||||::|||.|||:||||..:|||::|||...|..
  Fly   198 GDRLDGGITLEKGVTETDGESSTSYKIPIHADFLFSYSTIPGYFSWRNINNGSWYMQSLIRELNA 262

  Rat   226 YAHKLEFMHILTRVNRKVATEFESFSLDAT--FHAKKQIPCIVSMLTKELYF 275
            ...|.:.:.:||.||::||.:||| ::.||  ...:|||||:.||||:.|.|
  Fly   263 NGKKYDLLTLLTFVNQRVALDFES-NVPATPMMDRQKQIPCLTSMLTRILRF 313

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Casp3NP_037054.1 CASc 37..277 CDD:214521 96/245 (39%)
Dcp-1NP_476974.1 CASc 71..313 CDD:214521 95/243 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166340695
Domainoid 1 1.000 203 1.000 Domainoid score I2862
eggNOG 1 0.900 - - E1_KOG3573
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 210 1.000 Inparanoid score I3582
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D417543at33208
OrthoFinder 1 1.000 - - FOG0000242
OrthoInspector 1 1.000 - - mtm8999
orthoMCL 1 0.900 - - OOG6_103710
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X460
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1312.660

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