Protein Alignment Alx1 and Rx

DIOPT Version :9

• Sequence 1: NP_037053.1
• Gene: Alx1 / 25401
• RGDID: 2273
• Length: 326
• Species: Rattus norvegicus
• Sequence 2: NP_726006.3
• Gene: Rx / 37367
• FlyBaseID: FBgn0020617
• Length: 904
• Species: Drosophila melanogaster
• Alignment Length: 446
• Identity: 109/446 - (24%)
• Similarity: 158/446 - (35%)
• Gaps: 180/446 - (40%)

  Rat    29 EHVMETLDNESFYGKATAGKCVQAFGPLPRAEHHVRLDRTSPCQDSSVNYGITKVEGQPLHTELN 93
            :|......|.:..|.:.:|            :|..||:..|   ||.||......|      :||
  Fly   487 QHDFRNSGNGNPNGNSNSG------------DHGERLNADS---DSLVNGSCASSE------DLN 530

  Rat    94 RAMDGCNNLRMSPVKGMPEKSELDELGDKCDSNVSSSKKRRHRTTFTSLQLEELEKVFQKTHYPD 158
            :.        .|..:|....|..|:.|.  |.|.:..|.||:|||||:.||.|||:.|:|:||||
  Fly   531 QT--------NSSEQGEKITSGSDDEGQ--DDNCAKKKHRRNRTTFTTYQLHELERAFEKSHYPD 585

  Rat   159 VYVREQLALRTELTEARVQVWFQNRRAKWRKRERYGQIQQAKSHFAATYD--------------- 208
            ||.||:||::..|.|.||||||||||||||::|:...::...:||.....
  Fly   586 VYSREELAMKVNLPEVRVQVWFQNRRAKWRRQEKSESLRLGLTHFTQLPHRLGCGASGLPVDPWL 650

  Rat   209 ----ISVLPRTDSYPQI--------QNNLWAGNTSGGSVVT------------------------ 237
                :|.||...|:||.        ..:|..||.:..|:..
  Fly   651 SPPLLSALPGFLSHPQTVYPSYLTPPLSLAPGNLTMSSLAAMGHHHAHNGPPPPHVGHGGHGQPQ 715

  Rat   238 -----------------------------SCMLPRDASSCMTPYS---------HS---PRTDSS 261
                                         |.|.|. |:|..:|:.         ||   |.:.::
  Fly   716 PPPPPPPHGVPHPHGSHHVVPLSHLSPHLSRMSPH-ATSLGSPHHGVTPLGTPLHSSLPPSSTAT 779

  Rat   262 YTGFSNHQN---------------------QFGHVPLNNFFTD---SLLTGTTN---GHAFE--- 296
            ....|:.|:                     ..|:...|....|   .|..|:|:   |.:.:
  Fly   780 TVAVSSSQSSSSSASLECSGPDVCMSPQNLSIGNADSNGDGRDLSSDLDAGSTSSNPGSSLDKCA 844

  Rat   297 --------------------------TKPEFERRSSSIAVLRMKAKEHTANISWAM 326
                                      :.|..:.||:|||.||:|||||..|::..|
  Fly   845 ASANIELLDVGRDSPPPPPTPTGKGSSTPPTDMRSNSIATLRIKAKEHLDNLNKGM 900

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Alx1	NP_037053.1	Homeobox	135..188	CDD:278475	36/52 (69%)
		Transactivation domain. /evidence=ECO:0000269|PubMed:12390248	192..326		44/281 (16%)
		OAR	302..319	CDD:281777	11/16 (69%)
		OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138	306..319		9/12 (75%)
Rx	NP_726006.3	Homeobox	563..615	CDD:278475	36/51 (71%)
		OAR	876..892	CDD:281777	10/15 (67%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D454642at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.920