DRSC/TRiP Functional Genomics Resources

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Protein Alignment Camk2a and CaMKII

DIOPT Version :10

Sequence 1:XP_038952520.1 Gene:Camk2a / 25400 RGDID:2261 Length:489 Species:Rattus norvegicus
Sequence 2:NP_001162833.1 Gene:CaMKII / 43828 FlyBaseID:FBgn0264607 Length:531 Species:Drosophila melanogaster


Alignment Length:527 Identity:368/527 - (69%)
Similarity:423/527 - (80%) Gaps:52/527 - (9%)


- Green bases have known domain annotations that are detailed below.


  Rat     2 ATITCTRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRL 66
            |...||||::.|.:.|||||||||:|:|||:...|.|:||||||||||:|||.|||||||||||.
  Fly     3 APAACTRFSDNYDIKEELGKGAFSIVKRCVQKSTGFEFAAKIINTKKLTARDFQKLEREARICRK 67

  Rat    67 LKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGV 131
            |.|||||||||||.||.:|||:|||||||||||||||||:|||||||||||||||:|.||||.||
  Fly    68 LHHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHQNGV 132

  Rat   132 VHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDL 196
            |||||||||||||||.||||||||||||||||:|:.||||||||||||||||||:|:||||.||:
  Fly   133 VHRDLKPENLLLASKAKGAAVKLADFGLAIEVQGDHQAWFGFAGTPGYLSPEVLKKEPYGKSVDI 197

  Rat   197 WACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRIT 261
            ||||||||||||||||||||||||||.||||||||:|||||||||||||:|||:|||:||:||||
  Fly   198 WACGVILYILLVGYPPFWDEDQHRLYSQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPNKRIT 262

  Rat   262 AAEALKHPWISHRSTVASCMHRQETVDCLKKFNARRKLKGAILTTMLATRNFSGGKSGGNKKNDG 326
            ||||||||||..|..|||.:||||||||||||||||||||||||||||||||| .:|...||.:|
  Fly   263 AAEALKHPWICQRERVASVVHRQETVDCLKKFNARRKLKGAILTTMLATRNFS-SRSMITKKGEG 326

  Rat   327 VKKRKSSSSVQLMESSESTNTTIEDEDTK------------------------------------ 355
                     .|:.||::|::||:||:|.|                                    
  Fly   327 ---------SQVKESTDSSSTTLEDDDIKEDKKGTVDRSTTVVSKEPEDIRILCPAKTYQQNIGN 382

  Rat   356 ------VRKQEIIKVTEQLIEAISNGDFESYTKMCDPGMTAFEPEALGNLVEGLDFHRFYFENLW 414
                  .|:|||||:||||||||::|||:.|||:|||.:||||||||||||||:|||:|||||:.
  Fly   383 SQCSSAARRQEIIKITEQLIEAINSGDFDGYTKICDPHLTAFEPEALGNLVEGIDFHKFYFENVL 447

  Rat   415 SRNSKPVHTTILNPHIHLMGDESACIAYIRITQYLDAGGIPRTAQSEETRVWHRRDGKWQIVHFH 479
            .:|.|.::|||||||:||:|:|:|||||:|:|||:|..|...|.|||||||||:||.|||.||||
  Fly   448 GKNCKAINTTILNPHVHLLGEEAACIAYVRLTQYIDKQGHAHTHQSEETRVWHKRDNKWQNVHFH 512

  Rat   480 RSGAPSV 486
            ||.:..:
  Fly   513 RSASAKI 519

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Camk2aXP_038952520.1 STKc_CaMKII 11..302 CDD:270988 245/290 (84%)
CaMKII_AD 357..484 CDD:285524 90/126 (71%)
CaMKIINP_001162833.1 STKc_CaMKII 12..303 CDD:270988 245/290 (84%)
CaMKII_AD 390..517 CDD:285524 90/126 (71%)

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