DRSC/TRiP Functional Genomics Resources

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Protein Alignment Camk2a and CaMKI

DIOPT Version :9

Sequence 1:XP_038952520.1 Gene:Camk2a / 25400 RGDID:2261 Length:489 Species:Rattus norvegicus
Sequence 2:NP_524622.1 Gene:CaMKI / 43792 FlyBaseID:FBgn0016126 Length:405 Species:Drosophila melanogaster


Alignment Length:379 Identity:147/379 - (38%)
Similarity:205/379 - (54%) Gaps:38/379 - (10%)


- Green bases have known domain annotations that are detailed below.


  Rat    11 EEYQLFEELGKGAFSVVRRC-VKVLAGQEYAAKIINTKKLSARDHQKLEREARICR--------- 65
            |:|.|...||.||||.||.. .|...|:.:|.|||:.|.|..:: :.||.|.|:.|         
  Fly    29 EKYNLHGLLGTGAFSEVRLAESKDSPGEHFAVKIIDKKALKGKE-ESLENEIRVLRRFSANHFDG 92

  Rat    66 ------LLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVL 124
                  .|.|||||:|.::..::...||:.:||||||||:.||.:..|:|.||||.|:||||||.
  Fly    93 KCLNGTRLTHPNIVQLLETYEDKSKVYLVMELVTGGELFDRIVEKGSYTEKDASHLIRQILEAVD 157

  Rat   125 HCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLA-IEVEGEQQAWFGFAGTPGYLSPEVLRKD 188
            :.|:.|||||||||||||..|....:.:.::||||: :|..|....   ..|||||::||||.:.
  Fly   158 YMHEQGVVHRDLKPENLLYYSPDDDSKIMISDFGLSKMEDSGIMAT---ACGTPGYVAPEVLAQK 219

  Rat   189 PYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLT 253
            ||||.||:|:.|||.||||.|||||:||:...|:.||..|.::|.||.||.::..||..|..::.
  Fly   220 PYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGDFEFDSPYWDEISESAKHFIKNLMC 284

  Rat   254 INPSKRITAAEALKHPWISHRSTVASCMHRQETV-DCLKKFNARRKLKGAI--------LTTMLA 309
            :...||.|..:||.|.|||  ...||..:...|| :.|||..|:.:.|.|.        :..|..
  Fly   285 VTVEKRYTCKQALGHAWIS--GNEASSRNIHGTVSEQLKKNFAKSRWKQAYYAATVIRQMQRMAL 347

  Rat   310 TRNFSGGKSGGNKKNDGVKKRKSSSSVQLMESSESTNTTIEDEDTKVRKQEIIK 363
            ..|.:......|..|      :.|::......:.::|.....:..:...||:.|
  Fly   348 NSNSNANFDSSNSSN------QDSTTPTAATGAWTSNVLSSQQSVQSHAQEMNK 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Camk2aXP_038952520.1 STKc_CaMKII 11..302 CDD:270988 137/308 (44%)
CaMKII_AD 357..484 CDD:285524 3/7 (43%)
CaMKINP_524622.1 STKc_CaMKI 27..301 CDD:270985 125/275 (45%)
S_TKc 31..302 CDD:214567 124/274 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D330091at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X46
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.920

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