DRSC/TRiP Functional Genomics Resources

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Protein Alignment Camk2a and CASK

DIOPT Version :10

Sequence 1:XP_038952520.1 Gene:Camk2a / 25400 RGDID:2261 Length:489 Species:Rattus norvegicus
Sequence 2:NP_001262811.1 Gene:CASK / 42567 FlyBaseID:FBgn0013759 Length:929 Species:Drosophila melanogaster


Alignment Length:307 Identity:131/307 - (42%)
Similarity:189/307 - (61%) Gaps:17/307 - (5%)


- Green bases have known domain annotations that are detailed below.


  Rat     9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKK------LSARDHQKLEREARICRLL 67
            |.:.|:|.|.:|||.||:||||:...:.|::|.||::..|      ||..|   |:|||.||.:|
  Fly     8 FDDVYELCEVIGKGPFSIVRRCIHRESNQQFAVKIVDVAKFTASPGLSTAD---LKREATICHML 69

  Rat    68 KHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVARE----YYSEADASHCIQQILEAVLHCHQ 128
            |||:||.|.::.|.||..|::|:.:.|.:|..::|.|.    .||||.|.|.::|||||:.:||:
  Fly    70 KHPHIVELLETYSSEGMLYMVFEFMEGSDLCFEVVRRAVAGFVYSEAVACHYMRQILEALRYCHE 134

  Rat   129 MGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQA--WFGFAGTPGYLSPEVLRKDPYG 191
            ..::|||::|...|||:....|.|||..||.||::.|.::.  ..|..|.|.|::|||:.:..||
  Fly   135 NDILHRDVRPACALLATVDNSAPVKLGGFGSAIQLPGTRETIETHGRVGCPHYMAPEVVTRRLYG 199

  Rat   192 KPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINP 256
            |..|:|..||:|::||.|..||..... ||.|.:..|...|.:|||.:::..||||:.|||..||
  Fly   200 KGCDVWGAGVMLHVLLSGRLPFLGSGV-RLQQSVARGRLSFEAPEWKSISANAKDLVMKMLAANP 263

  Rat   257 SKRITAAEALKHPWISHRSTVASCMHRQETVDCLKKFNARRKLKGAI 303
            ..|::..|.|.||||..|..:.. .|..:||:.||::|||||||||:
  Fly   264 HHRLSITEVLDHPWIRDRDKLQR-THLADTVEELKRYNARRKLKGAV 309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Camk2aXP_038952520.1 STKc_CaMKII 11..302 CDD:270988 128/302 (42%)
CaMKII_AD 357..484 CDD:285524
CASKNP_001262811.1 STKc_CASK 8..308 CDD:270996 129/304 (42%)
L27 347..396 CDD:460717
L27 406..462 CDD:460717
PDZ_CASK-like 494..574 CDD:467267
SH3_CASK 586..646 CDD:213014
Guanylate_kin 710..883 CDD:395500
Blue background indicates that the domain is not in the aligned region.

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