DRSC/TRiP Functional Genomics Resources

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Protein Alignment Camk2a and PhKgamma

DIOPT Version :10

Sequence 1:XP_038952520.1 Gene:Camk2a / 25400 RGDID:2261 Length:489 Species:Rattus norvegicus
Sequence 2:NP_511129.3 Gene:PhKgamma / 32120 FlyBaseID:FBgn0011754 Length:560 Species:Drosophila melanogaster


Alignment Length:376 Identity:128/376 - (34%)
Similarity:190/376 - (50%) Gaps:42/376 - (11%)


- Green bases have known domain annotations that are detailed below.


  Rat     9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAKIIN----TKKLSARDHQKLE---REARICR- 65
            |..:|:..|.||:|..|.||||::...|:|:|||||:    |:......:..||   :|..|.| 
  Fly    19 FYAKYEPKEILGRGISSTVRRCIEKETGKEFAAKIIDLGATTESGETNPYHMLEATRQEISILRQ 83

  Rat    66 LLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMG 130
            ::.||.|:.|.|....:...:|:|:|...||||:.:.:....||......::||.|.|.:.|...
  Fly    84 VMGHPYIIDLQDVFESDAFVFLVFELCPKGELFDYLTSVVTLSEKKTRTIMRQIFEGVEYIHAKS 148

  Rat   131 VVHRDLKPENLLLASKLKGAAVKLADFGLAIEV-EGEQQAWFGFAGTPGYLSPEVLR------KD 188
            :|||||||||:||.   :...||:.|||.|.:: |||:..  ...||||||:||.|:      ..
  Fly   149 IVHRDLKPENILLD---ENHNVKITDFGFAKQLQEGEKLT--NLCGTPGYLAPETLKCNMFEGSP 208

  Rat   189 PYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLT 253
            .|.:.||:||||||::.||||.||||...|..:.:.|..|.|.|.||||..::.:.||||.|.|.
  Fly   209 GYSQEVDIWACGVIMFTLLVGCPPFWHRKQMVMLRNIMEGKYSFTSPEWADISEDPKDLIRKCLV 273

  Rat   254 INPSKRITAAEALKHPWISHRSTVASCMHRQETVDCLKKFNARRKLK--------GAILTTMLAT 310
            ::||:|||..|.|:||:.:....:....|....: ...:.|:|..|:        |.:.::....
  Fly   274 VDPSQRITVKEVLRHPFFNQMVLMGDRRHPAPPI-APAQTNSRHLLQPEASSYRFGQLNSSCAGA 337

  Rat   311 RNF----SGGKSGGNKKNDGVKKRKSSSSVQL---------MESSESTNTT 348
            .|:    .......|:..||......:|:...         ..:|.:||||
  Fly   338 PNYLYCAPQSSYSSNRMRDGALDDAGASAASATCHVMSPSNASNSYATNTT 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Camk2aXP_038952520.1 STKc_CaMKII 11..302 CDD:270988 116/313 (37%)
CaMKII_AD 357..484 CDD:285524
PhKgammaNP_511129.3 STKc_PhKG 19..291 CDD:270995 113/276 (41%)
Blue background indicates that the domain is not in the aligned region.

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