DRSC/TRiP Functional Genomics Resources

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Protein Alignment ef1a-a and eEF1alpha1

DIOPT Version :9

Sequence 1:NP_587757.1 Gene:ef1a-a / 2539035 PomBaseID:SPCC794.09c Length:460 Species:Schizosaccharomyces pombe
Sequence 2:NP_001286321.1 Gene:eEF1alpha1 / 36271 FlyBaseID:FBgn0284245 Length:463 Species:Drosophila melanogaster


Alignment Length:458 Identity:359/458 - (78%)
Similarity:404/458 - (88%) Gaps:2/458 - (0%)


- Green bases have known domain annotations that are detailed below.


pombe     1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVLDKLKA 65
            |||||.|||:||||||||||||||||||||||||||||||||||||.|:||||||||||||||||
  Fly     1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKA 65

pombe    66 ERERGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAVLIIGGGTGEFEAGISKD 130
            |||||||||||||||||.||.||:||||||||||||||||||||||||||:..|||||||||||:
  Fly    66 ERERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN 130

pombe   131 GQTREHALLAYTLGVKQLIVAVNKMDTT--GWSQARFEEIVKETSNFIKKVGFNPKTVPFVPVSG 193
            ||||||||||:|||||||||.|||||::  .:|:||:|||.||.|::|||:|:||..|.|||:||
  Fly   131 GQTREHALLAFTLGVKQLIVGVNKMDSSEPPYSEARYEEIKKEVSSYIKKIGYNPAAVAFVPISG 195

pombe   194 FQGDNMIEPTTNMPWYQGWQKETKAGVVKGKTLLEAIDSIEPPARPTDKPLRLPLQDVYKIGGIG 258
            :.||||:||:|||||::||:.|.|.|...||||::|:|:|.||||||||.|||||||||||||||
  Fly   196 WHGDNMLEPSTNMPWFKGWKVERKEGNADGKTLIDALDAILPPARPTDKALRLPLQDVYKIGGIG 260

pombe   259 TVPVGRVETGVIKPGMIVTFAPAGVTTEVKSVEMHHESLDAGLPGDNVGFNVKNVSVKDIRRGNV 323
            |||||||||||:|||.:|.||||.:||||||||||||:|...:|||||||||||||||::|||.|
  Fly   261 TVPVGRVETGVLKPGTVVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYV 325

pombe   324 CGDSKNDPPMGCASFTAQVIILNHPGQISAGYSPVLDCHTAHIACKFAELIEKIDRRSGKKIEES 388
            .||||.:||.|.|.||||||:|||||||:.||:||||||||||||||||:.||:||||||..||:
  Fly   326 AGDSKANPPKGAADFTAQVIVLNHPGQIANGYTPVLDCHTAHIACKFAEIKEKVDRRSGKTTEEN 390

pombe   389 PKFVKSGDACIAKMVPSKPMCVEAFTDYAPLGRFAVRDMRQTVAVGVIKAVEKVAPGAAKVTKAA 453
            |||:|||||.|..:|||||:|||||.::.||||||||||||||||||||||........||||||
  Fly   391 PKFIKSGDAAIVNLVPSKPLCVEAFQEFPPLGRFAVRDMRQTVAVGVIKAVNFKDASGGKVTKAA 455

pombe   454 VKA 456
            .||
  Fly   456 EKA 458

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ef1a-aNP_587757.1 PTZ00141 1..448 CDD:185474 351/448 (78%)
EF1_alpha 9..236 CDD:206670 180/228 (79%)
EF1_alpha_II 240..330 CDD:293894 73/89 (82%)
EF1_alpha_III 333..436 CDD:294004 79/102 (77%)
eEF1alpha1NP_001286321.1 PTZ00141 1..457 CDD:185474 357/455 (78%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 381 1.000 Domainoid score I131
eggNOG 1 0.900 - - E1_COG5256
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H68181
Inparanoid 1 1.050 740 1.000 Inparanoid score I84
OMA 1 1.010 - - QHG62187
OrthoFinder 1 1.000 - - FOG0000314
OrthoInspector 1 1.000 - - mtm9259
orthoMCL 1 0.900 - - OOG6_100227
Panther 1 1.100 - - O PTHR23115
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X149
TreeFam 1 0.960 - -
1312.830

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