DRSC/TRiP Functional Genomics Resources

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Protein Alignment EBF3 and SPT23

DIOPT Version :10

Sequence 1:NP_001362309.1 Gene:EBF3 / 253738 HGNCID:19087 Length:629 Species:Homo sapiens
Sequence 2:NP_012905.1 Gene:SPT23 / 853848 SGDID:S000001503 Length:1082 Species:Saccharomyces cerevisiae


Alignment Length:629 Identity:129/629 - (20%)
Similarity:210/629 - (33%) Gaps:224/629 - (35%)


- Green bases have known domain annotations that are detailed below.


Human    50 ARAHFEKQPPSN-LRKSNFFHFVLALYDRQGQPVEI--------ERTAFVD-------------- 91
            ||.:|....||: :.|..||       .....|..:        |||.|:|              
Yeast   147 ARKNFFIHLPSDCIAKDKFF-------TSSDDPTNLTIPNRDINERTLFLDAFLLCASNNNSNNF 204

Human    92 --------FVEKEKE---------------PNNEKTNNGIHYKLQL--LYSNGVRTEQ-----DL 126
                    .:.:||.               .|||.....|....||  :.:||:....     ||
Yeast   205 KQTYVCNRCINREKRRASRRKSGLNDNSIWQNNENKRAIIFNSKQLFIISNNGLSGNSNCINFDL 269

Human   127 YVRLI------DSMTKQAIVYEGQDKNPEMCRVLLTHEIMCSRCCDKKSCGNRNETPS------- 178
            ..|::      .:.....:::..:|.|.::....:|..||   ..|||:..| ..||:       
Yeast   270 PTRIVCYCRHHKATNGFVVLFLLRDHNGDILAKTITDPIM---IMDKKNASN-TTTPTSTSNAQV 330

Human   179 DPVIID-----------RFFLKFFLKCNQ-------NCL-----KNAGNPRDMRRFQVVVSTTVN 220
            .|:..|           .|..:|.|..|.       ||:     .|..|..|.:......:..:|
Yeast   331 SPMTNDTRSFSSPQSDLNFPSEFPLPSNSKNFVISTNCMLDSNCNNNNNDNDNKNNIKTNTAMMN 395

Human   221 VDGHV-----------LAVSDNMFVHNN-----------------------------------SK 239
            .:.|.           .:.||..|.:||                                   ::
Yeast   396 NNRHFPSPNSSSEDSNHSFSDIHFSNNNDNNLHRSLDSWSSTGFNSSSNPALTTLTSDFSAASAR 460

Human   240 H-GRRARR-------------------LDPSE-----GTAPSYLENATPCIKAISPSEGWTTGGA 279
            | |:|.|.                   :|.|:     .:.|..|.| .|.|:.:.|::|...||.
Yeast   461 HTGKRQRSVNEPFMSTPNTFSRLPQKFIDSSKDISNHNSVPVALNN-KPSIQRVIPAQGSINGGI 524

Human   280 TVIIIGDNFFDGLQVVFGTMLV-----WSE--LITPHAIRVQTPPRHIPGVVEVTLSYKSKQFCK 337
            .|.::|..|..||.:.||..:.     |:|  ::|      ..||...||.|.||:...|:...:
Yeast   525 EVTLLGSKFKQGLIIKFGENIALSSQCWNESTMVT------YLPPSSKPGPVLVTIVDPSETSMR 583

Human   338 GAPGRFVYTA--------LNEPTIDYGFQRLQKVIPRHPGDPERLPKEVLLKRAADLVEALYGMP 394
            ......|.|:        ||:.|   |    :|.|..:..|.:|...|:.|:        :.|:.
Yeast   584 NNSNSSVSTSNSTNDILHLNKYT---G----EKAIFTYVDDTDRQLIELALQ--------IVGLK 633

Human   395 HNNQEIILKRAADIAEALY---SVPRN-----HNQIPTLGNNPAHTGMMGVNSFSSQLAVNVSET 451
            .|.:   |:.|.:||:.:.   |.|.|     |:|..:|.   ::|.||. |....||...|.::
Yeast   634 MNGK---LEDARNIAKRIVGSDSSPSNNNAGLHSQNSSLN---SYTNMMR-NINDEQLITEVIKS 691

Human   452 SQANDQVGYSRNTSSVSPRGYVPSSTPQQSNYNTVSTSMNGYGS 495
            .:.|:.:. :.|.|....||.........:|:.::.:.:..|||
Yeast   692 FKRNNNLS-TVNLSMCDVRGRTLLHLAAFNNWYSLVSLLIKYGS 734

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EBF3NP_001362309.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..22
COE1_DBD 21..247 CDD:435333 60/351 (17%)
Interaction with DNA. /evidence=ECO:0000250 63..66 1/2 (50%)
Interaction with DNA. /evidence=ECO:0000250 197..204 3/11 (27%)
Interaction with DNA. /evidence=ECO:0000250 236..239 2/37 (5%)
IPT_COE 263..347 CDD:238580 25/90 (28%)
COE1_HLH 348..391 CDD:406751 10/42 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 451..483 5/31 (16%)
SPT23NP_012905.1 IPT 508..578 CDD:238050 23/75 (31%)
ANKYR 598..>779 CDD:440430 38/160 (24%)
ANK repeat 709..740 CDD:293786 6/26 (23%)
ANK repeat 742..767 CDD:293786
Blue background indicates that the domain is not in the aligned region.

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