DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment EBF3 and Ebf3

DIOPT Version :10

Sequence 1:NP_001362309.1 Gene:EBF3 / 253738 HGNCID:19087 Length:629 Species:Homo sapiens
Sequence 2:XP_030097945.1 Gene:Ebf3 / 13593 MGIID:894289 Length:629 Species:Mus musculus


Alignment Length:629 Identity:624/629 - (99%)
Similarity:625/629 - (99%) Gaps:0/629 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MFGIQENIPRGGTTMKEEPLGSGMNPVRSWMHTAGVVDANTAAQSGVGLARAHFEKQPPSNLRKS 65
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Mouse     1 MFGIQENIPRGGTTMKEEPLGSGMNPVRSWMHTAGVVDANTAAQSGVGLARAHFEKQPPSNLRKS 65

Human    66 NFFHFVLALYDRQGQPVEIERTAFVDFVEKEKEPNNEKTNNGIHYKLQLLYSNGVRTEQDLYVRL 130
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Mouse    66 NFFHFVLALYDRQGQPVEIERTAFVDFVEKEKEPNNEKTNNGIHYKLQLLYSNGVRTEQDLYVRL 130

Human   131 IDSMTKQAIVYEGQDKNPEMCRVLLTHEIMCSRCCDKKSCGNRNETPSDPVIIDRFFLKFFLKCN 195
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Mouse   131 IDSMTKQAIVYEGQDKNPEMCRVLLTHEIMCSRCCDKKSCGNRNETPSDPVIIDRFFLKFFLKCN 195

Human   196 QNCLKNAGNPRDMRRFQVVVSTTVNVDGHVLAVSDNMFVHNNSKHGRRARRLDPSEGTAPSYLEN 260
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Mouse   196 QNCLKNAGNPRDMRRFQVVVSTTVNVDGHVLAVSDNMFVHNNSKHGRRARRLDPSEGTAPSYLEN 260

Human   261 ATPCIKAISPSEGWTTGGATVIIIGDNFFDGLQVVFGTMLVWSELITPHAIRVQTPPRHIPGVVE 325
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Mouse   261 ATPCIKAISPSEGWTTGGATVIIIGDNFFDGLQVVFGTMLVWSELITPHAIRVQTPPRHIPGVVE 325

Human   326 VTLSYKSKQFCKGAPGRFVYTALNEPTIDYGFQRLQKVIPRHPGDPERLPKEVLLKRAADLVEAL 390
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Mouse   326 VTLSYKSKQFCKGAPGRFVYTALNEPTIDYGFQRLQKVIPRHPGDPERLPKEVLLKRAADLVEAL 390

Human   391 YGMPHNNQEIILKRAADIAEALYSVPRNHNQIPTLGNNPAHTGMMGVNSFSSQLAVNVSETSQAN 455
            |||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||
Mouse   391 YGMPHNNQEIILKRAADIAEALYSVPRNHNQIPTLGNTPAHTGMMGVNSFSSQLAVNVSETSQAN 455

Human   456 DQVGYSRNTSSVSPRGYVPSSTPQQSNYNTVSTSMNGYGSGAMASLGVPGSPGFLNGSSANSPYG 520
            ||||||||||||||||||||||||||||||||||||||||||||:||||||||||||||||||||
Mouse   456 DQVGYSRNTSSVSPRGYVPSSTPQQSNYNTVSTSMNGYGSGAMANLGVPGSPGFLNGSSANSPYG 520

Human   521 IVPSSPTMAASSVTLPSNCSSTHGIFSFSPANVISAVKQKSAFAPVVRPQASPPPSCTSANGNGL 585
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Mouse   521 IVPSSPTMAASSVTLPSNCSSTHGIFSFSPANVISAVKQKSAFAPVVRPQASPPPSCTSANGNGL 585

Human   586 QGSLLGAEDVAAEKTNWPFCEVGGIFHFDELMLKKGTGKLCLGW 629
            |||||||||...||||||||||||||||||||||||||||||||
Mouse   586 QGSLLGAEDATVEKTNWPFCEVGGIFHFDELMLKKGTGKLCLGW 629

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EBF3NP_001362309.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..22 20/20 (100%)
COE1_DBD 21..247 CDD:435333 225/225 (100%)
Interaction with DNA. /evidence=ECO:0000250 63..66 2/2 (100%)
Interaction with DNA. /evidence=ECO:0000250 197..204 6/6 (100%)
Interaction with DNA. /evidence=ECO:0000250 236..239 2/2 (100%)
IPT_COE 263..347 CDD:238580 83/83 (100%)
COE1_HLH 348..391 CDD:406751 42/42 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 451..483 31/31 (100%)
Ebf3XP_030097945.1 COE1_DBD 21..247 CDD:435333 225/225 (100%)
IPT_COE 263..347 CDD:238580 83/83 (100%)
COE1_HLH 348..391 CDD:406751 42/42 (100%)

Return to query results.
Submit another query.