Sequence 1: | NP_037016.2 | Gene: | Cntn2 / 25356 | RGDID: | 3821 | Length: | 1040 | Species: | Rattus norvegicus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001245581.1 | Gene: | Nrg / 31792 | FlyBaseID: | FBgn0264975 | Length: | 1309 | Species: | Drosophila melanogaster |
Alignment Length: | 1118 | Identity: | 302/1118 - (27%) |
---|---|---|---|
Similarity: | 476/1118 - (42%) | Gaps: | 155/1118 - (13%) |
- Green bases have known domain annotations that are detailed below.
Rat 7 KKASLLLLVLATVALVSSPGWSFAQGTPATFGPIFEEQPI--GLLF----PEESAEDQVTLACRA 65
Rat 66 RASPPATYRWKMNG---------TDMNLEPGSRHQLMGGNLVIMSPTKTQDAGVYQCLASNPVGT 121
Rat 122 VVSKEAVLRFGFLQEFSKEERDPVKTHEGWGVMLPCNPPAHYPGLSYRWLLNEFPNFIPTDG--- 183
Rat 184 ----RHFVSQTTGNLY---IARTNASDLGNYSCLATSHMDFSTK---SVFSKFAQLNLAAEDPRL 238
Rat 239 FAPSIKARFPP--------ETYALVGQQVTLECFAFGNPVPRIKWRKVDGSLSPQWATA------ 289
Rat 290 EPTLQIPSVSFEDEGTYECEAENSKGRDTVQGRII-VQAQPEWLKVISDTEADIGSNLRWGCAAA 353
Rat 354 GKPRPMVRWLRNGEPLASQN---RVEVLAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQ 415
Rat 416 ALAPDFRQNPVRRLIPAARGGEISILCQPRAAPKATILWSKGTEILGNSTRVTVTSDGTLIIRNI 480
Rat 481 SRSDEGKYTCFAENFMGKANSTGILSVRDATKITLAPSSADINVGDNLTLQCHASHDPTMDLTFT 545
Rat 546 WTLDDFPIDFDKPGGHYRRASAKETIGDLTILNAQLRHGGKYTCMAQTVVDGTSKEATVLVRGPP 610
Rat 611 GPPGGVVVRDIGDTTVQLSWSRGFDNHSPIAKYTLQ---ARTPPS--GKWKQVRTNPVNIEGNAE 670
Rat 671 TAQVLGLMPWMDYEFRVSASNILGTGEPSGPSSKIRTKEAVPSVAPSGLSGGGGAPGELIINWTP 735
Rat 736 VSREYQNGDGFGYLLSFRRQ-GSSSWQTARVPGADAQYFVYGNDSI----QP-YTPFEVKIRSYN 794
Rat 795 RRGDGPESLTALV-YSAEEEPRVAPAKVWAKG-SSSSEMNVSWEPVLQD-MNGILLGYEIRYWKA 856
Rat 857 GDNEAAADRVRTAGLDTSARVTGLNPNTKYHVTVRAYNRAGTGPASPSADAMTVKPPPRRPPGNI 921
Rat 922 SWTFSSSSLSLKWDPVVPLRNESTVTGYKMLYQN------------DLHPTPT---------LHL 965
Rat 966 TSKNWIEIPVPEDIGHA------------LVQIRTTGP--GGDGIPAEVHIVRNGGTSMMVESAA 1016
Rat 1017 ARPAHPGPAFSCM 1029 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Cntn2 | NP_037016.2 | Ig | 37..133 | CDD:416386 | 34/110 (31%) |
Ig strand A | 40..44 | CDD:409353 | 0/3 (0%) | ||
Ig strand A' | 47..52 | CDD:409353 | 3/8 (38%) | ||
Ig strand B | 58..66 | CDD:409353 | 1/7 (14%) | ||
Ig strand C | 71..77 | CDD:409353 | 2/5 (40%) | ||
Ig strand C' | 79..82 | CDD:409353 | 1/11 (9%) | ||
Ig strand D | 89..93 | CDD:409353 | 0/3 (0%) | ||
Ig strand E | 95..101 | CDD:409353 | 4/5 (80%) | ||
Ig strand F | 108..117 | CDD:409353 | 5/8 (63%) | ||
Ig strand G | 120..133 | CDD:409353 | 4/12 (33%) | ||
Ig2_Contactin-2-like | 141..230 | CDD:409392 | 25/101 (25%) | ||
Ig strand B | 153..157 | CDD:409392 | 2/3 (67%) | ||
Ig strand C | 167..171 | CDD:409392 | 0/3 (0%) | ||
Ig strand E | 192..196 | CDD:409392 | 3/6 (50%) | ||
Ig strand F | 206..211 | CDD:409392 | 2/4 (50%) | ||
Ig strand G | 224..227 | CDD:409392 | 0/2 (0%) | ||
Ig | 241..326 | CDD:416386 | 27/99 (27%) | ||
Ig strand A | 241..246 | CDD:409353 | 0/4 (0%) | ||
Ig strand A' | 249..254 | CDD:409353 | 1/12 (8%) | ||
Ig strand B | 257..266 | CDD:409353 | 2/8 (25%) | ||
Ig strand C | 272..276 | CDD:409353 | 0/3 (0%) | ||
Ig strand C' | 279..281 | CDD:409353 | 1/1 (100%) | ||
Ig strand E | 291..296 | CDD:409353 | 1/4 (25%) | ||
Ig strand F | 304..312 | CDD:409353 | 4/7 (57%) | ||
Ig strand G | 315..326 | CDD:409353 | 2/11 (18%) | ||
Ig4_Contactin-2-like | 330..414 | CDD:143205 | 25/86 (29%) | ||
Ig strand B | 346..350 | CDD:143205 | 0/3 (0%) | ||
Ig strand C | 359..363 | CDD:143205 | 0/3 (0%) | ||
Ig strand E | 380..384 | CDD:143205 | 0/3 (0%) | ||
Ig strand F | 394..399 | CDD:143205 | 2/4 (50%) | ||
Ig strand G | 407..410 | CDD:143205 | 1/2 (50%) | ||
Ig5_Contactin | 419..507 | CDD:409358 | 26/87 (30%) | ||
Ig strand B | 438..442 | CDD:409358 | 1/3 (33%) | ||
Ig strand C | 451..455 | CDD:409358 | 0/3 (0%) | ||
Ig strand E | 473..477 | CDD:409358 | 2/3 (67%) | ||
Ig strand F | 487..492 | CDD:409358 | 4/4 (100%) | ||
Ig strand G | 500..503 | CDD:409358 | 0/2 (0%) | ||
Ig | 509..605 | CDD:416386 | 27/95 (28%) | ||
Ig strand A | 509..515 | CDD:409353 | 2/5 (40%) | ||
Ig strand A' | 518..523 | CDD:409353 | 0/4 (0%) | ||
Ig strand B | 526..534 | CDD:409353 | 2/7 (29%) | ||
Ig strand C | 543..547 | CDD:409353 | 0/3 (0%) | ||
Ig strand D | 568..571 | CDD:409353 | 1/2 (50%) | ||
Ig strand E | 572..576 | CDD:409353 | 1/3 (33%) | ||
Ig strand F | 585..592 | CDD:409353 | 4/6 (67%) | ||
Ig strand G | 599..603 | CDD:409353 | 0/3 (0%) | ||
FN3 | 620..707 | CDD:238020 | 28/91 (31%) | ||
FN3 | 728..802 | CDD:238020 | 19/79 (24%) | ||
Cell attachment site. /evidence=ECO:0000255 | 796..798 | 1/1 (100%) | |||
FN3 | 817..909 | CDD:238020 | 26/93 (28%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 895..921 | 7/25 (28%) | |||
Nrg | NP_001245581.1 | Ig | 55..128 | CDD:299845 | 27/79 (34%) |
IG_like | 57..127 | CDD:214653 | 27/76 (36%) | ||
Ig | 135..214 | CDD:299845 | 21/83 (25%) | ||
IG_like | 141..216 | CDD:214653 | 20/79 (25%) | ||
ig | 251..332 | CDD:278476 | 24/82 (29%) | ||
I-set | 339..427 | CDD:254352 | 26/87 (30%) | ||
Ig | 354..427 | CDD:299845 | 23/72 (32%) | ||
I-set | 432..517 | CDD:254352 | 26/87 (30%) | ||
Ig | 446..517 | CDD:299845 | 24/71 (34%) | ||
I-set | 522..611 | CDD:254352 | 26/93 (28%) | ||
ig | 525..609 | CDD:278476 | 24/88 (27%) | ||
FN3 | 613..707 | CDD:238020 | 30/102 (29%) | ||
FN3 | 716..807 | CDD:238020 | 23/97 (24%) | ||
fn3 | 817..905 | CDD:278470 | 24/87 (28%) | ||
FN3 | 917..1004 | CDD:238020 | 22/88 (25%) | ||
FN3 | 1041..1111 | CDD:238020 | 5/20 (25%) | ||
Bravo_FIGEY | 1155..>1221 | CDD:290593 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3513 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |