Sequence 1: | NP_037016.2 | Gene: | Cntn2 / 25356 | RGDID: | 3821 | Length: | 1040 | Species: | Rattus norvegicus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001284756.1 | Gene: | sdk / 31017 | FlyBaseID: | FBgn0021764 | Length: | 2265 | Species: | Drosophila melanogaster |
Alignment Length: | 1129 | Identity: | 276/1129 - (24%) |
---|---|---|---|
Similarity: | 433/1129 - (38%) | Gaps: | 195/1129 - (17%) |
- Green bases have known domain annotations that are detailed below.
Rat 5 ARKKASLLLLVLATVALVSSPGWSFAQGTPATFGPIFEEQPI------------GLLFPEESAED 57
Rat 58 QVTLACRARASPPATYRWKMNGTDMNLEPGSRHQLMGGNLVIMSPTKTQDAGVYQCLASNPVGTV 122
Rat 123 VSKEAVLRFGFLQEFSKEERDPVKTHEGWGVMLPCNPPAHYPGLSYRWLLNEFP-NFIPTDGRHF 186
Rat 187 VSQTTGNLYIARTNASDLGNYSCLATSHMDFSTKSV--------FSKFAQLNLAAEDPRL-FAPS 242
Rat 243 IKARFPPETYALVGQQVT-LECFAFGNPVPRIK--WRKVDG----------SLSPQWATAEPTLQ 294
Rat 295 IPSVSFEDEGTYECEAE-NSKGRDTV--QGRIIVQAQPEWLKVI-SDTEADIGSNLRWGCAAAGK 355
Rat 356 PRPMVRWLRNGEPLASQNRVE----VLAGD--LRFSKLSLEDSGMYQCVAENKHGTIYAS----- 409
Rat 410 ----AELAVQALAPD------------------------------FRQNPVRRLIP----AARGG 436
Rat 437 EISILCQPRAAPKATILW-SKGTEILGNSTRVTVTSDGTLIIRNISRSDEGKYTCFAENFMGKAN 500
Rat 501 STGILSVRDATKITLAPSSADINVGDNLTLQCHASHDPTMDLTFTWTLDDFPIDFDKPGGHYRRA 565
Rat 566 SAKETI-----------GDLTILNAQLRHGGKYTCMAQTVVDGTSKEATVLVRGPPGPPGGVVVR 619
Rat 620 DIGD---TTVQLSWSRGFDNHSPIAKYTLQAR--------TPPSGKWKQVRTNPVNIEGNAETAQ 673
Rat 674 VLGLMPWMDYEFRVSASNILGTGEPSGPSSKIRTKEAVPSVAPSGLSGGGGAPGELIINWTPVSR 738
Rat 739 EYQNGDGFGYLLSFRRQGSSS--WQTARVPGADAQYFVYGNDSIQPYTPFEVKIRSYNRRGDGPE 801
Rat 802 SLTALVYSAEEEPRVAPAKVWAKGSSSSEMNVSWEPV-LQDMNGILLGYEIRYWKA----GDNEA 861
Rat 862 AADRVRTAG---LDTSARVT----GLNPNTKYHVTVRAYNRAGTGPASPSADAMTVKPPPRRPPG 919
Rat 920 NISWTFSSSSLSLKWDPVVPLRNESTVTGYKMLYQ---------------NDLHPTPT-LHLTSK 968
Rat 969 NWIEIPVPEDIGHALVQIRTTGPG 992 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Cntn2 | NP_037016.2 | Ig | 37..133 | CDD:416386 | 25/107 (23%) |
Ig strand A | 40..44 | CDD:409353 | 1/3 (33%) | ||
Ig strand A' | 47..52 | CDD:409353 | 1/4 (25%) | ||
Ig strand B | 58..66 | CDD:409353 | 2/7 (29%) | ||
Ig strand C | 71..77 | CDD:409353 | 4/5 (80%) | ||
Ig strand C' | 79..82 | CDD:409353 | 1/2 (50%) | ||
Ig strand D | 89..93 | CDD:409353 | 0/3 (0%) | ||
Ig strand E | 95..101 | CDD:409353 | 0/5 (0%) | ||
Ig strand F | 108..117 | CDD:409353 | 6/8 (75%) | ||
Ig strand G | 120..133 | CDD:409353 | 2/12 (17%) | ||
Ig2_Contactin-2-like | 141..230 | CDD:409392 | 15/97 (15%) | ||
Ig strand B | 153..157 | CDD:409392 | 0/3 (0%) | ||
Ig strand C | 167..171 | CDD:409392 | 1/3 (33%) | ||
Ig strand E | 192..196 | CDD:409392 | 0/3 (0%) | ||
Ig strand F | 206..211 | CDD:409392 | 1/4 (25%) | ||
Ig strand G | 224..227 | CDD:409392 | 1/2 (50%) | ||
Ig | 241..326 | CDD:416386 | 26/100 (26%) | ||
Ig strand A | 241..246 | CDD:409353 | 2/4 (50%) | ||
Ig strand A' | 249..254 | CDD:409353 | 0/4 (0%) | ||
Ig strand B | 257..266 | CDD:409353 | 3/9 (33%) | ||
Ig strand C | 272..276 | CDD:409353 | 0/5 (0%) | ||
Ig strand C' | 279..281 | CDD:409353 | 2/11 (18%) | ||
Ig strand E | 291..296 | CDD:409353 | 2/4 (50%) | ||
Ig strand F | 304..312 | CDD:409353 | 3/8 (38%) | ||
Ig strand G | 315..326 | CDD:409353 | 3/12 (25%) | ||
Ig4_Contactin-2-like | 330..414 | CDD:143205 | 28/99 (28%) | ||
Ig strand B | 346..350 | CDD:143205 | 0/3 (0%) | ||
Ig strand C | 359..363 | CDD:143205 | 1/3 (33%) | ||
Ig strand E | 380..384 | CDD:143205 | 2/5 (40%) | ||
Ig strand F | 394..399 | CDD:143205 | 3/4 (75%) | ||
Ig strand G | 407..410 | CDD:143205 | 2/11 (18%) | ||
Ig5_Contactin | 419..507 | CDD:409358 | 27/122 (22%) | ||
Ig strand B | 438..442 | CDD:409358 | 1/3 (33%) | ||
Ig strand C | 451..455 | CDD:409358 | 2/4 (50%) | ||
Ig strand E | 473..477 | CDD:409358 | 2/3 (67%) | ||
Ig strand F | 487..492 | CDD:409358 | 2/4 (50%) | ||
Ig strand G | 500..503 | CDD:409358 | 0/2 (0%) | ||
Ig | 509..605 | CDD:416386 | 22/106 (21%) | ||
Ig strand A | 509..515 | CDD:409353 | 2/5 (40%) | ||
Ig strand A' | 518..523 | CDD:409353 | 0/4 (0%) | ||
Ig strand B | 526..534 | CDD:409353 | 4/7 (57%) | ||
Ig strand C | 543..547 | CDD:409353 | 0/3 (0%) | ||
Ig strand D | 568..571 | CDD:409353 | 0/2 (0%) | ||
Ig strand E | 572..576 | CDD:409353 | 2/3 (67%) | ||
Ig strand F | 585..592 | CDD:409353 | 3/6 (50%) | ||
Ig strand G | 599..603 | CDD:409353 | 0/3 (0%) | ||
FN3 | 620..707 | CDD:238020 | 29/97 (30%) | ||
FN3 | 728..802 | CDD:238020 | 20/75 (27%) | ||
Cell attachment site. /evidence=ECO:0000255 | 796..798 | 0/1 (0%) | |||
FN3 | 817..909 | CDD:238020 | 28/103 (27%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 895..921 | 8/25 (32%) | |||
sdk | NP_001284756.1 | Ig | 71..157 | CDD:299845 | 23/95 (24%) |
I-set | 72..150 | CDD:254352 | 22/87 (25%) | ||
Ig | 172..245 | CDD:299845 | 13/86 (15%) | ||
IG_like | 280..356 | CDD:214653 | 19/79 (24%) | ||
Ig | 280..343 | CDD:299845 | 15/66 (23%) | ||
IG_like | 375..450 | CDD:214653 | 26/76 (34%) | ||
Ig | 378..447 | CDD:143165 | 25/70 (36%) | ||
Ig | 506..587 | CDD:299845 | 24/80 (30%) | ||
IG_like | 506..587 | CDD:214653 | 24/80 (30%) | ||
I-set | 592..682 | CDD:254352 | 21/104 (20%) | ||
Ig | 595..682 | CDD:299845 | 20/101 (20%) | ||
FN3 | 686..789 | CDD:238020 | 34/105 (32%) | ||
FN3 | 798..893 | CDD:238020 | 23/96 (24%) | ||
FN3 | 901..1005 | CDD:238020 | 28/103 (27%) | ||
fn3 | 1011..1094 | CDD:278470 | 19/84 (23%) | ||
FN3 | 1108..1202 | CDD:238020 | |||
FN3 | 1210..1308 | CDD:238020 | |||
fn3 | 1317..1402 | CDD:278470 | |||
FN3 | 1415..1507 | CDD:238020 | |||
FN3 | 1513..1608 | CDD:238020 | |||
fn3 | 1617..1708 | CDD:278470 | |||
FN3 | 1722..1823 | CDD:238020 | |||
FN3 | 1828..1920 | CDD:238020 | |||
FN3 | 1927..2016 | CDD:238020 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |