DRSC/TRiP Functional Genomics Resources

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Protein Alignment CADM2 and cadm2a

DIOPT Version :10

Sequence 1:XP_016861551.1 Gene:CADM2 / 253559 HGNCID:29849 Length:449 Species:Homo sapiens
Sequence 2:XP_005155320.1 Gene:cadm2a / 793954 ZFINID:ZDB-GENE-040426-1614 Length:442 Species:Danio rerio


Alignment Length:452 Identity:289/452 - (63%)
Similarity:342/452 - (75%) Gaps:13/452 - (2%)


- Green bases have known domain annotations that are detailed below.


Human     1 MIWKRSAVLRFYSVCGLLLQGKHINHSSVIRLH---QGSQGQFPLTQNVTVVEGGTAILTCRVDQ 62
            |:.|:..:...||:||::|  |.|...||....   :|:|||.||.||:||.|||||.|||||:.
Zfish     1 MMVKQHMLFTLYSICGIVL--KDILAVSVAATKNKVRGAQGQVPLVQNMTVTEGGTANLTCRVEH 63

Human    63 NDNTSLQWSNPAQQTLYFDDKKALRDNRIELVRASWHELSISVSDVSLSDEGQYTCSLFTMPVKT 127
            ||||||||||||||||:|.|||||||||||||||:..||:||:|:|||||||.||||||||||||
Zfish    64 NDNTSLQWSNPAQQTLFFGDKKALRDNRIELVRATSQELTISISEVSLSDEGLYTCSLFTMPVKT 128

Human   128 SKAYLTVLGVPEKPQISGFSSPVMEGDLMQLTCKTSGSKPAADIRWFKNDKEIKDVKYLKEEDAN 192
            :||:|||||||:||:|:|.:.||:|||.:.|||.|||||||||:|||||:.|:|..   ||.:|:
Zfish   129 AKAFLTVLGVPKKPEINGLTKPVLEGDHITLTCVTSGSKPAADVRWFKNEMEVKGA---KEVNAS 190

Human   193 RKTFTVSSTLDFRVDRSDDGVAVICRVDHESLNATPQVAMQVLEIHYTPSVKIIPSTPFPQEGQP 257
            .|||||.|:|...|:|.|||||..|||||.:|.||.:...||||:||.|.|:|..||..|||||.
Zfish   191 GKTFTVKSSLRLHVNRDDDGVAYTCRVDHVALTATHEETTQVLEVHYAPYVEIRQSTNVPQEGQY 255

Human   258 LILTCESKGKPLPEPVLWTKDGGELPDPDRMVVSGRELNILFLNKTDNGTYRCEATNTIGQSSAE 322
            |.|.|..||.|.|:|||||||||||||.|||:|.||:|....|||||||||||||||.:|.|.||
Zfish   256 LKLQCVPKGNPSPDPVLWTKDGGELPDMDRMIVDGRDLTFTSLNKTDNGTYRCEATNHLGTSHAE 320

Human   323 YVLIVHDVPNTLLPTTIIPSLTTATVTTTVAITTSPTTSATTSSIRDPNALAGQNGPDHALIGGI 387
            :.|:::|.|.|..|:|..|:.|..  .||..:.:....||.|.: ||||.|  :...||||||||
Zfish   321 FKLVIYDAPTTPSPSTTSPAPTLP--DTTGPLDSKQLNSAVTGN-RDPNEL--KRATDHALIGGI 380

Human   388 VAVVVFVTLCSIFLLGRYLARHKGTYLTNEAKGAEDAPDADTAIINAEGSQVNAEEKKEYFI 449
            ||||||.|||.|.:||||||||||||||||||||:||||||||||||:|:..:|||||||||
Zfish   381 VAVVVFATLCLIIVLGRYLARHKGTYLTNEAKGADDAPDADTAIINADGNHAHAEEKKEYFI 442

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CADM2XP_016861551.1 IgV_1_Necl-3 40..135 CDD:409498 76/94 (81%)
Ig strand A 40..43 CDD:409498 1/2 (50%)
FR1 41..59 CDD:409498 13/17 (76%)
Ig strand A' 44..50 CDD:409498 4/5 (80%)
Ig strand B 52..60 CDD:409498 6/7 (86%)
CDR1 60..65 CDD:409498 2/4 (50%)
FR2 66..73 CDD:409498 6/6 (100%)
Ig strand C 66..72 CDD:409498 5/5 (100%)
CDR2 74..85 CDD:409498 8/10 (80%)
Ig strand C' 76..80 CDD:409498 3/3 (100%)
Ig strand C' 82..85 CDD:409498 2/2 (100%)
FR3 86..121 CDD:409498 27/34 (79%)
Ig strand D 90..97 CDD:409498 6/6 (100%)
Ig strand E 100..106 CDD:409498 4/5 (80%)
Ig strand F 113..121 CDD:409498 6/7 (86%)
CDR3 122..125 CDD:409498 2/2 (100%)
Ig strand G 125..135 CDD:409498 7/9 (78%)
FR4 127..134 CDD:409498 4/6 (67%)
IgI_2_Necl-3 134..237 CDD:409467 61/102 (60%)
Ig strand A 135..138 CDD:409467 2/2 (100%)
Ig strand A' 141..145 CDD:409467 2/3 (67%)
Ig strand B 154..164 CDD:409467 5/9 (56%)
Ig strand C 167..176 CDD:409467 7/8 (88%)
Ig strand C' 177..180 CDD:409467 0/2 (0%)
Ig strand D 182..189 CDD:409467 1/6 (17%)
Ig strand E 195..205 CDD:409467 6/9 (67%)
Ig strand F 213..221 CDD:409467 5/7 (71%)
Ig strand G 229..236 CDD:409467 2/6 (33%)
Ig_3 241..314 CDD:464046 50/72 (69%)
4.1m 402..420 CDD:128590 17/17 (100%)
cadm2aXP_005155320.1 IgV_1_Necl-3 41..136 CDD:409498 76/94 (81%)
Ig strand A 41..44 CDD:409498 1/2 (50%)
FR1 42..60 CDD:409498 13/17 (76%)
Ig strand A' 45..51 CDD:409498 4/5 (80%)
Ig strand B 53..61 CDD:409498 6/7 (86%)
CDR1 61..66 CDD:409498 2/4 (50%)
FR2 67..74 CDD:409498 6/6 (100%)
Ig strand C 67..73 CDD:409498 5/5 (100%)
CDR2 75..86 CDD:409498 8/10 (80%)
Ig strand C' 77..81 CDD:409498 3/3 (100%)
Ig strand C' 83..86 CDD:409498 2/2 (100%)
FR3 87..122 CDD:409498 27/34 (79%)
Ig strand D 91..98 CDD:409498 6/6 (100%)
Ig strand E 101..107 CDD:409498 4/5 (80%)
Ig strand F 114..122 CDD:409498 6/7 (86%)
CDR3 123..126 CDD:409498 2/2 (100%)
Ig strand G 126..136 CDD:409498 7/9 (78%)
FR4 128..135 CDD:409498 4/6 (67%)
Ig 135..235 CDD:472250 61/102 (60%)
Ig strand B 157..161 CDD:409353 1/3 (33%)
Ig strand C 171..175 CDD:409353 2/3 (67%)
Ig strand E 198..202 CDD:409353 2/3 (67%)
Ig strand F 212..217 CDD:409353 2/4 (50%)
Ig strand G 228..231 CDD:409353 0/2 (0%)
Ig_3 239..312 CDD:464046 50/72 (69%)
4.1m 395..413 CDD:128590 17/17 (100%)

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