DRSC/TRiP Functional Genomics Resources

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Protein Alignment FZD2 and mom-5

DIOPT Version :9

Sequence 1:NP_001457.1 Gene:FZD2 / 2535 HGNCID:4040 Length:565 Species:Homo sapiens
Sequence 2:NP_001300437.1 Gene:mom-5 / 172856 WormBaseID:WBGene00003397 Length:570 Species:Caenorhabditis elegans


Alignment Length:560 Identity:214/560 - (38%)
Similarity:303/560 - (54%) Gaps:71/560 - (12%)


- Green bases have known domain annotations that are detailed below.


Human    36 HGF-----CQPISIPLCTDIAYNQTIMPNLLGHTNQEDAGLEVHQFYPLVKVQCSPELRFFLCSM 95
            :||     |:.|:||:|.::.||||:.|||||||.|.:||..:.||.||:||:||.::|.|||::
 Worm    29 NGFSTTRKCEHITIPMCKNLDYNQTVFPNLLGHTTQSEAGPAIAQFNPLIKVKCSEDIRLFLCTV 93

Human    96 YAPVCTVLEQAIPPCRSICERARQGCEALMNKFGFQWPERLRCEHFPRHGAEQICVGQNHSE--- 157
            |||||||||:.|.|||.:|..|:.|||:||.|||||||::|.|..||   ...:|||:|.||   
 Worm    94 YAPVCTVLEKPIQPCRELCLSAKNGCESLMKKFGFQWPDQLDCNKFP---VTDLCVGKNSSESSN 155

Human   158 --------DGAPALLTTAPPPGLQPGAGGTPGGPGGGGAPPRYATLEHPFHCPRVLKVP--SYLS 212
                    |....:.|.|....|.|.                        .||..:...  |:.|
 Worm   156 SKNYRSSNDVTFGVSTIANEVVLSPK------------------------KCPHHMHTTSGSHFS 196

Human   213 YKFLGER--DCAAPCEPARPDGSMFFSQEETRFARLWILTWSVLCCASTFFTVTTYLVDMQRFRY 275
            ...|..|  :|:..|| |.....|.|.....|..|:|...|||.|...:.||:.|:|||:.||.|
 Worm   197 LPLLSGRLPECSLTCE-ADNQVPMMFDGRVRRILRIWTAAWSVACFVCSLFTLVTFLVDLSRFAY 260

Human   276 PERPIIFLSGCYTMVSVAYIAGFVLQERVVCNERFSEDGYRTVVQGTKKEGCTILFMMLYFFSMA 340
            |.|||::|:.||..:|..|:.|.|.::...|. .:.......|.||.:..||:.|.::.|||.|:
 Worm   261 PVRPILYLAFCYLAISTVYMIGVVGEDGFACG-TYGSTPTTLVTQGGENVGCSALAVVHYFFFMS 324

Human   341 SSIWWVILSLTWFLAAGMKWGHEAIEANSQYFHLAAWAVPAVKTITILAMGQIDGDLLSGVCFVG 405
            |..||::|.|.|||||.:|||.|:|.|.|.|||...|.||||.::|:|....:|||:.:|:|.||
 Worm   325 SCAWWLVLCLAWFLAANLKWGAESIAALSPYFHAMCWGVPAVLSVTVLVTNSVDGDVFTGICSVG 389

Human   406 LNSLDP--LRGFVLAPLFVYLFIGTSFLLAGFVSLFRIRTIMKHDGTKTE----KLERLMVRIGV 464
              :|:|  |..|...|:.|.|.:|...|:.|..|:.|||:.:|......|    |||:||:|||.
 Worm   390 --NLNPSALVYFFFTPIVVSLALGAVLLVCGIWSMIRIRSYIKLQHADVERNISKLEKLMLRIGA 452

Human   465 FSVLYTVPATIVIACYFYEQAFREHWERSWVSQHCKSL--------AIP---CPAHYTPRM-SPD 517
            |:::|::|..:..|..:|:......|...|:...|..|        ..|   ||  ..|:: :|:
 Worm   453 FAIMYSLPTAMNAAIMWYQAVNMPAWLEGWLHHRCVRLQDRELFGFTYPVDDCP--MDPKVAAPE 515

Human   518 FTVYMIKYLMTLIVGITSGFWIWSGKTLHSWRKFYTRLTN 557
            ..|:::||:..|:||||...|:.|.|||.|:.|.|..|::
 Worm   516 IIVFLLKYVSQLVVGITCAIWVVSSKTLSSYHKAYLALSS 555

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FZD2NP_001457.1 CRD_FZ2 35..161 CDD:143573 71/140 (51%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 160..189 4/28 (14%)
7tmF_FZD2 234..563 CDD:320373 129/342 (38%)
TM helix 1 244..268 CDD:320373 9/23 (39%)
TM helix 2 277..298 CDD:320373 8/20 (40%)
TM helix 3 328..350 CDD:320373 9/21 (43%)
TM helix 4 371..387 CDD:320373 8/15 (53%)
TM helix 5 409..432 CDD:320373 8/24 (33%)
TM helix 6 463..485 CDD:320373 6/21 (29%)
TM helix 7 514..539 CDD:320373 9/25 (36%)
Lys-Thr-X-X-X-Trp motif, mediates interaction with the PDZ domain of Dvl family members. /evidence=ECO:0000250 543..548 3/4 (75%)
PDZ-binding 563..565
mom-5NP_001300437.1 CRD_FZ1_like 35..147 CDD:143567 63/114 (55%)
7tmF_Frizzled_SMO 219..550 CDD:320089 127/335 (38%)
TM helix 1 228..253 CDD:320089 9/24 (38%)
TM helix 2 262..282 CDD:320089 8/19 (42%)
TM helix 3 312..338 CDD:320089 11/25 (44%)
TM helix 4 355..371 CDD:320089 8/15 (53%)
TM helix 5 393..422 CDD:320089 9/28 (32%)
TM helix 6 446..473 CDD:320089 10/26 (38%)
TM helix 7 512..537 CDD:320089 9/24 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 251 1.000 Domainoid score I1282
eggNOG 1 0.900 - - E1_KOG3577
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 401 1.000 Inparanoid score I1230
Isobase 1 0.950 - 0 Normalized mean entropy S3599
OMA 1 1.010 - - QHG48699
OrthoDB 1 1.010 - - D167933at33208
OrthoFinder 1 1.000 - - FOG0001848
OrthoInspector 1 1.000 - - otm15852
orthoMCL 1 0.900 - - OOG6_104642
Panther 1 1.100 - - O PTHR11309
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X126
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.790

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