DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment FYN and skb5

DIOPT Version :9

Sequence 1:NP_001357458.1 Gene:FYN / 2534 HGNCID:4037 Length:537 Species:Homo sapiens
Sequence 2:NP_588016.1 Gene:skb5 / 2539237 PomBaseID:SPCC24B10.13 Length:140 Species:Schizosaccharomyces pombe


Alignment Length:51 Identity:18/51 - (35%)
Similarity:29/51 - (56%) Gaps:0/51 - (0%)


- Green bases have known domain annotations that are detailed below.


Human    88 VALYDYEARTEDDLSFHKGEKFQILNSSEGDWWEARSLTTGETGYIPSNYV 138
            |||||:|...:::|.|..|::..||:.|...|..|....:|.:|.:|..:|
pombe    86 VALYDFEPLHDNELGFTTGQRLCILSESSDGWLIAYDDASGRSGLVPETFV 136

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FYNNP_001357458.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 14..35
SH3_Fyn_Yrk 85..140 CDD:212939 18/51 (35%)
SH2_Src_Fyn_isoform_a_like 145..245 CDD:198281
PTKc_Fyn 261..534 CDD:270655
skb5NP_588016.1 SH3_Nbp2-like 84..138 CDD:212799 18/51 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 42 1.000 Domainoid score I4126
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000006
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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