DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment FYN and Fyn

DIOPT Version :9

Sequence 1:NP_001357458.1 Gene:FYN / 2534 HGNCID:4037 Length:537 Species:Homo sapiens
Sequence 2:XP_006256584.1 Gene:Fyn / 25150 RGDID:2641 Length:575 Species:Rattus norvegicus


Alignment Length:537 Identity:535/537 - (99%)
Similarity:535/537 - (99%) Gaps:0/537 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MGCVQCKDKEATKLTEERDGSLNQSSGYRYGTDPTPQHYPSFGVTSIPNYNNFHAAGGQGLTVFG 65
            |||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat    39 MGCVQCKDKEAAKLTEERDGSLNQSSGYRYGTDPTPQHYPSFGVTSIPNYNNFHAAGGQGLTVFG 103

Human    66 GVNSSSHTGTLRTRGGTGVTLFVALYDYEARTEDDLSFHKGEKFQILNSSEGDWWEARSLTTGET 130
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   104 GVNSSSHTGTLRTRGGTGVTLFVALYDYEARTEDDLSFHKGEKFQILNSSEGDWWEARSLTTGET 168

Human   131 GYIPSNYVAPVDSIQAEEWYFGKLGRKDAERQLLSFGNPRGTFLIRESETTKGAYSLSIRDWDDM 195
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   169 GYIPSNYVAPVDSIQAEEWYFGKLGRKDAERQLLSFGNPRGTFLIRESETTKGAYSLSIRDWDDM 233

Human   196 KGDHVKHYKIRKLDNGGYYITTRAQFETLQQLVQHYSERAAGLCCRLVVPCHKGMPRLTDLSVKT 260
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   234 KGDHVKHYKIRKLDNGGYYITTRAQFETLQQLVQHYSERAAGLCCRLVVPCHKGMPRLTDLSVKT 298

Human   261 KDVWEIPRESLQLIKRLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKLKHDK 325
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   299 KDVWEIPRESLQLIKRLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKLKHDK 363

Human   326 LVQLYAVVSEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRD 390
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   364 LVQLYAVVSEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRD 428

Human   391 LRSANILVGNGLICKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGIL 455
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   429 LRSANILVGNGLICKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGIL 493

Human   456 LTELVTKGRVPYPGMNNREVLEQVERGYRMPCPQDCPISLHELMIHCWKKDPEERPTFEYLQSFL 520
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||
  Rat   494 LTELVTKGRVPYPGMNNREVLEQVERGYRMPCPQDCPISLHELMIHCWKKDPEERPTFEYLQGFL 558

Human   521 EDYFTATEPQYQPGENL 537
            |||||||||||||||||
  Rat   559 EDYFTATEPQYQPGENL 575

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FYNNP_001357458.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 14..35 20/20 (100%)
SH3_Fyn_Yrk 85..140 CDD:212939 54/54 (100%)
SH2_Src_Fyn_isoform_a_like 145..245 CDD:198281 99/99 (100%)
PTKc_Fyn 261..534 CDD:270655 271/272 (100%)
FynXP_006256584.1 SH3_Fyn_Yrk 123..178 CDD:212939 54/54 (100%)
SH2_Src_Fyn_isoform_a_like 183..283 CDD:198281 99/99 (100%)
PTKc_Fyn 299..572 CDD:270655 271/272 (100%)
Pkinase_Tyr 309..558 CDD:285015 247/248 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C83693401
Domainoid 1 1.000 510 1.000 Domainoid score I6920
eggNOG 1 0.900 - - E2759_KOG0197
HGNC 1 1.500 - -
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H48068
Inparanoid 1 1.050 1107 1.000 Inparanoid score I4655
NCBI 1 1.000 - -
OMA 1 1.010 - - QHG52589
OrthoDB 1 1.010 - - D116646at32523
OrthoFinder 1 1.000 - - FOG0000006
OrthoInspector 1 1.000 - - oto132885
orthoMCL 1 0.900 - - OOG6_100661
Panther 1 1.100 - - LDO PTHR24418
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1168
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1818.270

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