DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nfyb and NC2beta

DIOPT Version :9

Sequence 1:NP_113741.1 Gene:Nfyb / 25336 RGDID:3172 Length:207 Species:Rattus norvegicus
Sequence 2:NP_609736.1 Gene:NC2beta / 34875 FlyBaseID:FBgn0028926 Length:183 Species:Drosophila melanogaster


Alignment Length:93 Identity:34/93 - (36%)
Similarity:57/93 - (61%) Gaps:1/93 - (1%)


- Green bases have known domain annotations that are detailed below.


  Rat    51 SFREQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKTING 115
            |..:.::.||.|::.:|:|..:| |.::|.:::|.:..|.||||..|:|||:|.|:...:||||.
  Fly    12 SAEDDELTLPRASINKIIKELVP-TVRVANESRELILNCCSEFIHLISSEANEVCNMRNKKTINA 75

  Rat   116 EDILFAMSTLGFDSYVEPLKLYLQKFRE 143
            |.:|.|:..|||..|.:..:..|...:|
  Fly    76 EHVLEALERLGFHDYKQEAEAVLHDCKE 103

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity