DRSC/TRiP Functional Genomics Resources

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Protein Alignment CDY1B and chp1

DIOPT Version :10

Sequence 1:NP_001003895.1 Gene:CDY1B / 253175 HGNCID:23920 Length:554 Species:Homo sapiens
Sequence 2:NP_593666.1 Gene:chp1 / 2542239 PomBaseID:SPAC18G6.02C Length:960 Species:Schizosaccharomyces pombe


Alignment Length:475 Identity:95/475 - (20%)
Similarity:157/475 - (33%) Gaps:178/475 - (37%)


- Green bases have known domain annotations that are detailed below.


Human     6 FEVEAIVDKRQDKNGNTQYLVRWKGYDKQDDTWEPEQHLMNCEKCVHDFNRRQTEKQKKLTWTTT 70
            :|||.|:..|.:|||..:|.::|.|||..|:||||||:|...||.:     ::.:|:|||.....
pombe    22 YEVEDILADRVNKNGINEYYIKWAGYDWYDNTWEPEQNLFGAEKVL-----KKWKKRKKLIAKGL 81

Human    71 SRIF---SNNARRRTSRSTKANYSKNSPKTPVTDKHHRSKNRKLFAASKNVRRKAA----SILSD 128
            ...|   .|.|::...........:...|:.:|....:.|.:     .|.:|:|.|    :|.:|
pombe    82 LEPFDAEDNEAKKMKREKEILRQQRQKRKSELTQLSQKVKEK-----FKKMRKKPARRIVTIAND 141

Human   129 TKNMEIINSTIETLAPDSPFDHKTVSGFQKLEKL------------------DPIAADQQDTVVF 175
            .:..:  :.|::    :..|:.|::.|..|...|                  :|....:..||..
pombe   142 EEEED--DQTMD----EDAFERKSMQGELKERNLTDKTSTLSTSFGETSPDVNPFYLSEWPTVTD 200

Human   176 KVTEGKLLRD---PLSRPGAEQT------------GIQNKTQIH--------------------- 204
            .:...|.|..   ||.....:.|            ||||...:.                     
pombe   201 SILLSKSLSSDAIPLKNGEIKSTMLMPSDSDNSVPGIQNSNNLENTGAFVENANSPQSNTPLSTF 265

Human   205 ----------------------------PLMSQM----------SGSVTASMATGSATRKGIVVL 231
                                        ||.|.:          :.::..|..:||.|::.|:..
pombe   266 RHSSPLSLSPVITSDNDVANSLFFSNSTPLPSSLKIKKEAPKLETHTILVSDNSGSLTKQDILSY 330

Human   232 IDPLAAN----------------------------------GTTDMHTSVPRVKGGQRNITDDSR 262
            ...:..|                                  |....|.::  |||   .|:.|..
pombe   331 FAFIKGNIEVFFLKSPKKDKVCNMAYIQFDSIEQAKLAYDKGHPSWHVTL--VKG---KISTDME 390

Human   263 DQPFIKKMHFTIRLTESASTYRDIVVKKED----GFTQIVLSTRS-TEKNALNTEVIKEI---VN 319
            :....|.:   ::.|.|         ||.:    .|||....|.| :||.|.|.::.:..   ||
pombe   391 ECKVSKSI---LKTTPS---------KKANARSVSFTQTTTDTLSESEKFASNVDLDENFDFNVN 443

Human   320 ALNSAAADDSKLVLFSAAGS 339
            ..|    :|:|.:..|..||
pombe   444 VTN----EDAKQLKKSVIGS 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CDY1BNP_001003895.1 CD_CDY 5..56 CDD:349284 23/49 (47%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 76..106 4/29 (14%)
crotonase-like 286..482 CDD:119339 19/62 (31%)
chp1NP_593666.1 CD_Chp1_like 21..72 CDD:349286 23/54 (43%)
RRM_SF 313..373 CDD:409669 6/59 (10%)
SPOC_Chp1p 518..650 CDD:439208
Blue background indicates that the domain is not in the aligned region.

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