Sequence 1: | XP_008770309.2 | Gene: | Dcc / 25311 | RGDID: | 2492 | Length: | 1447 | Species: | Rattus norvegicus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_523716.2 | Gene: | fra / 36377 | FlyBaseID: | FBgn0011592 | Length: | 1526 | Species: | Drosophila melanogaster |
Alignment Length: | 1686 | Identity: | 486/1686 - (28%) |
---|---|---|---|
Similarity: | 732/1686 - (43%) | Gaps: | 433/1686 - (25%) |
- Green bases have known domain annotations that are detailed below.
Rat 13 LAFVLFGASLLSAHLQVTGFQIKPFTSLHFVSEPSDAVTMRGGNVLLNCS--------AESDRGV 69
Rat 70 P---VIKWK-KDGLILALGMDDRKQQLPNGSLLIQNILHSRHHKPDEGLYQCEASLGDSGSIISR 130
Rat 131 TAKVMVAGPLRFLSQTESITAFM------GDTVLLKCEVIGDPMPTIHWQKN--------QQDLN 181
Rat 182 PIPGDS-RVVVLPSGALQISRLQPGDSGVYRCSARNPASTRTGNEAEVRIL--SDPGLHRQL--Y 241
Rat 242 FLQRPSNVIAIEGKDAVLECCVSGYPPPSFTWLRGEEVIQLR--SKKYSLLGGSNLLISNVTDDD 304
Rat 305 SGTYTCVVTYKNENISASAELTVLVPPWFLNHPSNLYAYESMDIEFECAVSGKPVPTVNWMKNGD 369
Rat 370 VVIPSDYFQIVGGSNLRILGVVKSDEGFYQCVAENEAGNAQSSAQL-IVPK-------------- 419
Rat 420 ----------------------------------------------------------------- 419
Rat 420 ----------------------------------------------------------------- 419
Rat 420 ----PAIPSS--------------------SILPSAPRDVVPVLVSSRFVRLSWRPPAEAKGNIQ 460
Rat 461 TFTVFFSREGDNRERALNTTQPGSLQLTVGNLKPEAMYTFRVVAYNEWGPGESSQPIKVATQPEL 525
Rat 526 QVPGPVENLHAVSASPTSILITWEPPAYANGPVQGYRLFCTEVSTGKEQNIEVDGLSYKLEGLKK 590
Rat 591 FTEYTLRFLAYNRYGPGVSTDDITVVTLSDVPSAPPQNVSLEVVNSRSIKVSWLPPPSGTQNGFI 655
Rat 656 TGYKIRHRKTTRRGEMETLEPNNLWYLFTGLEKGSQYSFQVSAMTVNGTGPPSNWYTAETPENDL 720
Rat 721 DESQVPDQPSSLHVRPQTNCIIMSWTPPLNPNIVVRGYIIGYGVGSPYAETVRVDSKQRYYSIER 785
Rat 786 LESSSHYVISLKAFNNAGEGVPLYESATTRSITDPTDPVDYYPLLDDFPTSGPDVSTPMLPPVGV 850
Rat 851 QAVALTHEAVRVSWADNSVPKNQKTSDVRLYTVRWRTSFSASAKYKSEDTTSLSYTATGLKPNTM 915
Rat 916 YEFSVMVTKNRRSSTWSMTAHATTYEAAPTSAPKDLTVITREGKPRAVIVSWQPPLEANGKITAY 980
Rat 981 ILFYTLDKNIPIDDWIMETISGDRLTHQIMDLSLDTMYYFRIQARNAKGV--GPLSDPILFRT-- 1041
Rat 1042 -LKVEHPDKMANDQGRHGDGGYWPVDTNLIDRSTLNEPPIGQMHPPHGSVTPQKNSNLLVITVVT 1105
Rat 1106 VGVLTVLVVVIVAVICTRR--SSAQQRKKRATHSASKRKGSQKDLRPPDLWIHHEEMEMKNIEKP 1168
Rat 1169 AGTDPAGRGSPIQSCQDLTPVSHSQSESQMGS----KSASHSGQDTEE--AGSSMSTLERSLAAR 1227
Rat 1228 RATRTKLMIPMEAQSNNPAVVSAIPVPTLESAQYPGILPSPTCGYPHPQFTLRPVPFPTLSVDRG 1292
Rat 1293 FGAGRSQSVSEGPTAQQQPMLPPAQ-----PEHPSSE------EAPSRTIPTACV------RPTH 1340
Rat 1341 PLRSFANPLLPPPMSAIEPKVPYTPLLS-QPGPTLPKTHVKTASLGLAGKARSPLLPVSVPT--- 1401
Rat 1402 ---------------APEVSEESHKPTEDPASVYEQDDLSEQMASLEGLMKQLNAITGSAF 1447 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Dcc | XP_008770309.2 | None | |||
fra | NP_523716.2 | Ig | 36..140 | CDD:299845 | 38/106 (36%) |
Ig | <180..222 | CDD:299845 | 19/42 (45%) | ||
IG_like | 257..340 | CDD:214653 | 25/82 (30%) | ||
IGc2 | 264..327 | CDD:197706 | 21/62 (34%) | ||
I-set | 344..430 | CDD:254352 | 38/85 (45%) | ||
Ig | 363..428 | CDD:299845 | 31/64 (48%) | ||
FN3 | 611..703 | CDD:238020 | 35/91 (38%) | ||
FN3 | 711..799 | CDD:238020 | 26/87 (30%) | ||
FN3 | 806..897 | CDD:238020 | 38/90 (42%) | ||
FN3 | 908..989 | CDD:238020 | 30/80 (38%) | ||
FN3 | 1011..1097 | CDD:238020 | 36/87 (41%) | ||
FN3 | 1109..1205 | CDD:238020 | 34/95 (36%) | ||
Neogenin_C | 1273..1521 | CDD:284094 | 81/336 (24%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 92 | 1.000 | Domainoid score | I7420 |
eggNOG | 1 | 0.900 | - | - | E1_KOG4221 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 786 | 1.000 | Inparanoid score | I493 |
OMA | 1 | 1.010 | - | - | QHG46607 | |
OrthoDB | 1 | 1.010 | - | - | D118438at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0002773 | |
OrthoInspector | 1 | 1.000 | - | - | otm45219 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_105369 | |
Panther | 1 | 1.100 | - | - | O | PTHR44170 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X1863 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
13 | 12.880 |