DRSC/TRiP Functional Genomics Resources

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Protein Alignment STXBP4 and Patj

DIOPT Version :9

Sequence 1:XP_016879899.1 Gene:STXBP4 / 252983 HGNCID:19694 Length:571 Species:Homo sapiens
Sequence 2:NP_477342.1 Gene:Patj / 44100 FlyBaseID:FBgn0067864 Length:871 Species:Drosophila melanogaster


Alignment Length:626 Identity:127/626 - (20%)
Similarity:220/626 - (35%) Gaps:171/626 - (27%)


- Green bases have known domain annotations that are detailed below.


Human    21 QMITIAKE-TGLGLKVLGGINRNEGPLVYIQEIIPGGDCYKDGRLKPGDQLVSVNKESMIGVSFE 84
            |.|.:..: ||||..::|.  ||.|  |.::.|:|||...|||||:.||.::.:...::..:..|
  Fly   148 QAIELVNDGTGLGFGIIGA--RNSG--VIVKTILPGGVADKDGRLRSGDHILQIGDVNLHEMVSE 208

Human    85 EAKSIITGAKLSTRLESAWEIAFIRQKSDNIQPENLSC---TSLIEASGEYGPQASTLSLFSSP- 145
            :..:::..:....||..|      |....::.....:.   |:::.......|......|.|:. 
  Fly   209 QVAAVLRQSGTHVRLVVA------RPVEQSVPTPQYALEPGTAVVPTRVLVDPAELERYLISTGY 267

Human   146 PEIL-IPKTSSTPKTN------------------NDILSSCELLSHTVRLIPGIQSKKIKTGYNK 191
            |||. ...|:|||:|.                  |..|.....|..|.:|  .::.||...|...
  Fly   268 PEIFGESSTASTPQTTTEDDRFVYRGETSMLIDPNIDLEELLALPETEKL--QVELKKDANGLGI 330

Human   192 TVQIPITSENSTVGLSNTDVASAWTENYGLQEKISLNPS-VRFKAEKLEMALNYLGIQPTKEQHQ 255
            |:...:..:....|:....|:.....:  |..:|.:|.. :....:.|:...|:..::..|:..|
  Fly   331 TIAGYVCEKEELSGIFVKSVSPGSAAD--LSGRIRVNDRIIEVDGQSLQGYSNHQAVELLKKSGQ 393

Human   256 A----------------LRQQVQADSK------GTVSFGDF-----------VQVARNLFCLQLD 287
            .                |:|.:.|:.|      ||.|....           ...:|:: ..:|:
  Fly   394 VVNLRLERYLRGPKFEQLQQAIAANDKLPSSAPGTPSRAPMPTPVATTSSATTTPSRSI-TRELE 457

Human   288 EVNVGAHEI-----------------------------------SNILDSQLLP-CDSSEADEME 316
            |..:.|.|.                                   :.|:.::::| .|.:||....
  Fly   458 EEALPAPEAFMTTPPSVTTMTTTTLSSFGAGKQLVAVRDSLDGSTKIIPTEVVPLADKTEAKNSG 522

Human   317 RLKCER--------DDALKEVNTLKEKLLESD-----KQRKQLTEELQNVKQEAKAVVEETR--- 365
            .:...:        |||..|:....:|::.||     .|.|:.......:..|....||..|   
  Fly   523 VITRHKYYTDPELSDDAETEIIRKWQKIVGSDVEVIVAQIKKFAVGGLGISLEGTVDVEGGREVR 587

Human   366 ------------------ALRSRIHLAEAAQRQAHGMEMDYEEVIRLLEAKITELKAQLADYSDQ 412
                              .|||...|.|....:..|  |::.||:.:|:    ||...:.....:
  Fly   588 PHHYIRSILPDGPVGVNGVLRSGDELLEVNGERLLG--MNHLEVVAILK----ELPLDVRMVCGR 646

Human   413 NKESVQDLKKRIMVLDCQLRKSEMARKTFEASTEKLLHFVEAIQEVFSDNS-TPLSNLSERRAVL 476
            |:.|            ..|..|:...|....:.|.||...:.:.:..||.| ....::::..:|.
  Fly   647 NRNS------------SLLPFSDDTLKKLSNNFENLLPATDRLVKAKSDGSLATAGSVADGDSVA 699

Human   477 ASQTSLTPLGRNGRSI-PAT-LALESK-----ELVKSVRAL 510
            |:..|.:.|  ..||: |.| ||:.|.     ||||..|.|
  Fly   700 AAAASFSKL--KSRSLEPLTGLAMWSSQPQIIELVKGDRGL 738

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
STXBP4XP_016879899.1 None
PatjNP_477342.1 L27 12..70 CDD:295425
PDZ_signaling 154..226 CDD:238492 23/75 (31%)
PDZ_signaling 318..400 CDD:238492 13/83 (16%)
PDZ_signaling 557..643 CDD:238492 18/91 (20%)
PDZ_signaling 726..807 CDD:238492 6/13 (46%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19964
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
22.010

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