DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Drgx and Drgx

DIOPT Version :9

Sequence 1:NP_665710.2 Gene:Drgx / 252880 RGDID:628616 Length:263 Species:Rattus norvegicus
Sequence 2:NP_001097075.2 Gene:Drgx / 5740176 FlyBaseID:FBgn0085369 Length:587 Species:Drosophila melanogaster


Alignment Length:483 Identity:131/483 - (27%)
Similarity:156/483 - (32%) Gaps:246/483 - (50%)


- Green bases have known domain annotations that are detailed below.


  Rat     1 MFYFHCPPQLEGTAPFGNH----STGDF------------------DDGFLRRKQRRNRTTFTLQ 43
            ||.:.|||.|.   |.|.|    .|.|:                  |:.|:||||||||||||||
  Fly     1 MFCYQCPPALH---PCGPHPPRLPTLDYPFAATHPYTSYSYHPAIHDETFVRRKQRRNRTTFTLQ 62

  Rat    44 QLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRRAKWRKTERGASDQ---EPG---- 101
            |||.||..|||||||||||||:|||||||||||||||||||||||||.||...:|   |.|    
  Fly    63 QLEELETAFAQTHYPDVFTREDLAMKINLTEARVQVWFQNRRAKWRKAERLKDEQRKRENGESSS 127

  Rat   102 -------AKEPMAEVT----------PP------PVRN--------------------------- 116
                   ::|...::|          ||      |:.|                           
  Fly   128 SLDKLHDSRESSPDITGEIDDDMDDLPPRQRSHSPLANGQMEQQHSHSHSHSHSRSPGGGMHLDS 192

  Rat   117 ---------------------------INSPPPGDQAR--------------------------- 127
                                       ..||.|....|                           
  Fly   193 SDNERPLSSNQLTATPHSASQSLGSISAGSPSPSGMHREREHTPLVGGGGQGPSSPSNSRNTDSP 257

  Rat   128 -----------GKKEALEAQQSLGRTVGPAGPFFPSCLPGTLLNTATYAQAL------------- 168
                       |.:.|..:..|...|..|..|..|.....:....|.:...:             
  Fly   258 IEVGGPMSLTTGSRMAASSNNSASSTPTPTTPHAPQMPHSSAAAAAAFGSHIFGNFGGGSNASDS 322

  Rat   169 -----------------------------------SHVAS----------LKG-GP---LCSCC- 183
                                               .|:|:          ||| .|   ||||| 
  Fly   323 NCGFRPVLSEQSAVAAAAAAAAAQRSANHPPLFLPPHLAAQFTHQPLFPGLKGVSPFQSLCSCCS 387

  Rat   184 --VPDPMGLSFL------------------PTYGCQSN----RTASVAALRMKAREHSEAVLQSA 224
              .|.|.|.|.:                  |....|.:    |:.|||.||.||:|||.|:|||.
  Fly   388 LKPPPPPGSSVVAPLSIPVSSSSAASSPESPKSSGQGSVHDPRSNSVAELRRKAQEHSAALLQSL 452

  Rat   225 NL------------LPSTSSSPGPASKQ 240
            :.            ||..|.:..||..|
  Fly   453 HAAAAAGLAFPGLHLPPLSFAHHPALGQ 480

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DrgxNP_665710.2 Homeobox 37..90 CDD:395001 48/52 (92%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 88..135 20/168 (12%)
OAR 201..218 CDD:397759 10/20 (50%)
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 204..217 8/12 (67%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 219..263 10/34 (29%)
DrgxNP_001097075.2 Homeobox 56..108 CDD:278475 40/65 (62%)
OAR 428..445 CDD:281777


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 111 1.000 Domainoid score I6134
eggNOG 1 0.900 - - E33208_3B9E5
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 163 1.000 Inparanoid score I4113
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1097815at2759
OrthoFinder 1 1.000 - - FOG0000011
OrthoInspector 1 1.000 - - oto97892
orthoMCL 1 0.900 - - OOG6_108990
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X5686
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
109.770

Return to query results.
Submit another query.