DRSC/TRiP Functional Genomics Resources

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Protein Alignment Acsl1 and bgm

DIOPT Version :9

Sequence 1:NP_036952.1 Gene:Acsl1 / 25288 RGDID:2015 Length:699 Species:Rattus norvegicus
Sequence 2:NP_001285923.1 Gene:bgm / 44117 FlyBaseID:FBgn0027348 Length:666 Species:Drosophila melanogaster


Alignment Length:678 Identity:170/678 - (25%)
Similarity:297/678 - (43%) Gaps:116/678 - (17%)


- Green bases have known domain annotations that are detailed below.


  Rat    90 VRTMYDG------------FQRGIQVSNDGPCLGSRKPNQPYEWISYKQVAEMAECIGSALIQKG 142
            :|...||            .:|.:....|.|.|.::.....|..::|||..:....:..|.|:.|
  Fly    33 IRMAKDGIGAEEPISVPGLLKRTVNNYGDYPALRTKNGKNGYHTVTYKQYEQKVHQVAKAFIKLG 97

  Rat   143 FKPCSEQFIGIFSQNRPEWVTIEQGCFTYSMVVVPLYDTLGTDAITYIVNKAELSVIFADKPEKA 207
            .:  ....:|:.:.|..||.....|......::..:|.|...||:.:::..:...::..|   .|
  Fly    98 LE--EHHSVGVLAFNCAEWFYSAMGAIHARGIIAGIYTTNSADAVQHVLESSHAQIVVVD---DA 157

  Rat   208 KLL--LEGVENKLTPCLKIIVIMDSYDNDLVERG---QKCGVEIIGLKALED--LGRVNRTKPKP 265
            |.:  :..:.:||......|.|.:.|...|.:..   :...:|.:.:..:||  :.|:       
  Fly   158 KQMDKIHAIRDKLPKLKAAIQIQEPYSPYLKKEDGYYRWSEIESMNVSDVEDQYMTRL------- 215

  Rat   266 PEPEDLAI-----ICFTSGTTGNPKGAMVTHQNIMNDCSGFIKATESAFIASPEDVLISFLPLAH 325
               |::||     :.:||||.|.|||.|::|.||..|..|.:||.:...:.:  :.::|:|||:|
  Fly   216 ---ENVAINECCCLVYTSGTVGMPKGVMLSHDNITFDVRGIVKAMDRVVVGA--ESIVSYLPLSH 275

  Rat   326 MFETVVECVMLCHGAKIGFFQGDI---------RLLMDDLKVLQPTIFPVVPRLLNRMFDRIFGQ 381
            :....|: :..|     .|..|.|         ..|:..|:..:||.|..|||:..:..:|:...
  Fly   276 VAAQTVD-IYTC-----AFVAGCIWFADKDALKGTLVKSLQDARPTRFMGVPRVYEKFQERMVAV 334

  Rat   382 ANT--SVKRWLLDFASKRKEAELRSGIVRNN--------SLWDKLIFHKIQSSLG-GKVRLMITG 435
            |::  |:|:.|   ||..|...|:..:|...        .:...||..|::.:|| .:|..:.:.
  Fly   335 ASSSGSLKKML---ASWAKGITLKHYMVSQGKSSGGFRYKIAKSLIMSKVKQALGFDRVLTLASA 396

  Rat   436 AAPVS-ATVLTFLRAALGCQFYEGYGQTECTAGC-CLSLPGDWTAGHVGAPMPCNYIKLVDVEDM 498
            |||:| .|...||  :|..:..:.:|.:| |||| .:.||.......:|..:|....|.::.:  
  Fly   397 AAPMSPETKKYFL--SLDLKIVDAFGMSE-TAGCHTICLPDSVGLNTIGKTLPGCESKFINKD-- 456

  Rat   499 NYQAAKGEGEVCVKGANVFKGYLKDPARTAEALDKDGWLHTGDIGKWLPNGTLKIIDRKKHIFKL 563
                |.|.||:|::|.:||.||:.:..:|.|:||.|.|||:||:|.....|.:.:..|.|.|...
  Fly   457 ----ANGHGELCIRGRHVFMGYIDNKEKTEESLDDDCWLHSGDLGFVDDKGYVSLTGRSKEIIIT 517

  Rat   564 AQGEYIAPEKIEN-IYLRSEAVAQVFVHGESLQAFLIAIVVPDVEI--------------LPSWA 613
            |.||.|.|..||| |....:|::..|:.||. :.:|..::....|:              ...|.
  Fly   518 AGGENIPPVHIENTIKKELDAISNAFLVGEQ-RKYLTVLITLKTEVDKDSGEPLDELSHESSVWV 581

  Rat   614 QKRGFQGSFEELCRNKDINKAI-----------LEDMVKLGKNAGLKPFEQVKGIAVHPELFSID 667
            :..|.:        :|.::..:           :||.:|......:...::|:...:.|..|||.
  Fly   582 KSLGVE--------HKTVSDILAAGPCPKVWKSIEDAIKRANKQSISNAQKVQKFTILPHDFSIP 638

  Rat   668 NGLLTPTLKAKRPELRNYFRSQIDELYS 695
            .|.|.||||.||..:...:..:|::||:
  Fly   639 TGELGPTLKVKRNVVSKMYADEIEKLYA 666

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Acsl1NP_036952.1 LC-FACS_euk 117..695 CDD:341250 162/637 (25%)
bgmNP_001285923.1 FAA1 32..666 CDD:223953 169/676 (25%)
ACSBG_like 69..665 CDD:213299 161/639 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1022
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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