DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tcf21 and CG33557

DIOPT Version :9

Sequence 1:NP_001027569.1 Gene:Tcf21 / 252856 RGDID:620523 Length:179 Species:Rattus norvegicus
Sequence 2:NP_001014730.1 Gene:CG33557 / 3346145 FlyBaseID:FBgn0053557 Length:150 Species:Drosophila melanogaster


Alignment Length:151 Identity:44/151 - (29%)
Similarity:64/151 - (42%) Gaps:29/151 - (19%)


- Green bases have known domain annotations that are detailed below.


  Rat     1 MSTGSLSDVEDLQEVEMLDCDSLKVDSNKEFGTSNESTEEGSNCENGSPQKGRGGLGKRRKAPTK 65
            :|:.|.|....|..|...|.:|....|.......:|.::.|.....|. |:.:|  ..||:.|.:
  Fly     3 VSSSSSSFSNYLMAVFAQDSNSSGSASGSGAAADSEDSQIGQEANPGG-QENQG--NHRRRPPRQ 64

  Rat    66 KSPLSGVSQEGKQVQRNAANARERARMRVLSKAFSRLKTTLPWVPPDTKLSKLDTLRLASSYIAH 130
            |                 .|||||.|...::.|:..|:..:|..|.:.||||::.:|||||||.|
  Fly    65 K-----------------INARERYRTFNVNSAYEALRNLIPTEPMNRKLSKIEIIRLASSYITH 112

  Rat   131 LRQILAN---------DKYEN 142
            |...|..         .|||:
  Fly   113 LSSTLETGTECQPCLLHKYES 133

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tcf21NP_001027569.1 bHLH_TS_TCF21_capsulin 77..140 CDD:381547 24/71 (34%)
CG33557NP_001014730.1 HLH 67..119 CDD:197674 24/51 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166343480
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4029
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.740

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