Sequence 1: | NP_036936.1 | Gene: | Abcd3 / 25270 | RGDID: | 2007 | Length: | 659 | Species: | Rattus norvegicus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001259732.1 | Gene: | Pmp70 / 32992 | FlyBaseID: | FBgn0031069 | Length: | 665 | Species: | Drosophila melanogaster |
Alignment Length: | 670 | Identity: | 384/670 - (57%) |
---|---|---|---|
Similarity: | 487/670 - (72%) | Gaps: | 21/670 - (3%) |
- Green bases have known domain annotations that are detailed below.
Rat 3 AFSKYLTARNSS----LAGAAFLLFCLLHKRRRALGLHGKKSGKPPLQNN------EKEGKKE-R 56
Rat 57 AVVDKVFLSRLSQILKIMVPRTFCKETGYLILIAVMLVSRTYCDVWMIQNGTLIESGIIGRSSKD 121
Rat 122 FKRYLFNFIAAMPLISLVNNFLKYGLNELKLCFRVRLTRYLYEEYLQAFTYYKMGNLDNRIANPD 186
Rat 187 QLLTQDVEKFCNSVVDLYSNLSKPFLDIVLYIFKLTSAIGAQGPASMMAYLLVSGLFLTRLRRPI 251
Rat 252 GKMTIMEQKYEGEYRFVNSRLITNSEEIAFYNGNKREKQTIHSVFRKLVEHLHNFIFFRFSMGFI 316
Rat 317 DSIIAKYIATVVGYLVVSRPFLDLAHPRHLHSTHSELLEDYYQSGRMLLRMSQALGRIVLAGREM 381
Rat 382 TRLAGFTARITELMQVLKDLNHGKYERTMVSQQD--KGIEGAQASPLIPGAGEIINADNIIKFDH 444
Rat 445 VPLATPNGDILIQDLSFEVRSGANVLICGPNGCGKSSLFRVLGELWPLFGGHLTKPERGKLFYVP 509
Rat 510 QRPYMTLGTLRDQVIYPDGKEDQKKKGISDQVLKGYLDNVQLGHILEREGGWDSVQDWMDVLSGG 574
Rat 575 EKQRMAMARLFYHKPQFAILDECTSAVSVDVEDYIYSHCRKVGITLFTVSHRKSLWKHHEYYLHM 639
Rat 640 DGRGNYEFKKITEDTVEFGS 659 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Abcd3 | NP_036936.1 | 3a01203 | 1..647 | CDD:273360 | 377/656 (57%) |
Interaction with PEX19. /evidence=ECO:0000250 | 2..199 | 92/206 (45%) | |||
Targeting to peroxisomes. /evidence=ECO:0000250 | 2..124 | 47/131 (36%) | |||
ABC_membrane_2 | 59..338 | CDD:284003 | 154/278 (55%) | ||
ABCD_peroxisomal_ALDP | 440..645 | CDD:213190 | 153/204 (75%) | ||
Pmp70 | NP_001259732.1 | 3a01203 | 3..653 | CDD:273360 | 377/656 (57%) |
ABC_membrane_2 | 63..342 | CDD:284003 | 154/278 (55%) | ||
ABCD_peroxisomal_ALDP | 446..651 | CDD:213190 | 153/204 (75%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166352267 | |
Domainoid | 1 | 1.000 | 313 | 1.000 | Domainoid score | I1260 |
eggNOG | 1 | 0.900 | - | - | E1_COG4178 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H2140 | |
Inparanoid | 1 | 1.050 | 757 | 1.000 | Inparanoid score | I528 |
OMA | 1 | 1.010 | - | - | QHG53776 | |
OrthoDB | 1 | 1.010 | - | - | D146647at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000393 | |
OrthoInspector | 1 | 1.000 | - | - | oto95951 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_100236 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR11384 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X313 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
16 | 15.770 |