DRSC/TRiP Functional Genomics Resources

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Protein Alignment X11L and APBA3

DIOPT Version :9

Sequence 1:NP_001285376.1 Gene:X11L / 252671 FlyBaseID:FBgn0026313 Length:1170 Species:Drosophila melanogaster
Sequence 2:XP_006723013.1 Gene:APBA3 / 9546 HGNCID:580 Length:650 Species:Homo sapiens


Alignment Length:684 Identity:225/684 - (32%)
Similarity:309/684 - (45%) Gaps:197/684 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   434 PVLEDGLSSGHASDTENNVSVVC---DKQQSSQSQPVHEHNGNGERLENDYNVMSASLATLTTDA 495
            |.:....|...|.|.|....::.   |....||..|:....|:..|:|.|             ::
Human     4 PTISRSPSGPPAMDLEGPRDILVPSEDLTPDSQWDPMPGGPGSLSRMELD-------------ES 55

  Fly   496 SQSALISDFASLP---MPPAPPPSSPPQIEIAD----ASESMTMVPDADNPLDSHYGAVYAAA-- 551
            |...|:..|.:||   :.|: |..:|..:.||.    ||:.:.         |:| |.:.|.|  
Human    56 SLQELVQQFEALPGDLVGPS-PGGAPCPLHIATGHGLASQEIA---------DAH-GLLSAEAGR 109

  Fly   552 ---LGGTHTEKSAGSGLGVTPVTAGGSLPSQAASEIQEAMKEIRSALQRAKTQPEKLKFCDEVLP 613
               ||..|.|:..               |||...|  |.::.....||..:...|          
Human   110 DDLLGLLHCEECP---------------PSQTGPE--EPLEPAPRLLQPPEDPDE---------- 147

  Fly   614 TDPDSPVWVPRKGTTISTAQGAAADEEPDTDLETDRLLGQQRHDEQDFFADQSLADNNANEGTDI 678
             |.|||.||          :||:|::|                                      
Human   148 -DSDSPEWV----------EGASAEQE-------------------------------------- 163

  Fly   679 ASNGHLNGTSDNNNPNPMNNSKPQTYSTATIRQGIGTSLTPNSPDICQIVGTTDISISSPEKLQF 743
                  ...|.:::|.|...:.|              .:||..|         .....|||.|..
Human   164 ------GSRSSSSSPEPWLETVP--------------LVTPEEP---------PAGAQSPETLAS 199

  Fly   744 TKSPTGSIKSLKDSANSDKKAKSRNKEGLLEPKVLIEGVLFRARYLGSTQLVCEGQPTKSTRMMQ 808
            ..:|                   :...|..:.:.|::||:|.||||||||||.|..|..||||.|
Human   200 YPAP-------------------QEVPGPCDHEDLLDGVIFGARYLGSTQLVSERNPPTSTRMAQ 245

  Fly   809 AEEAVSRIKALAPEGESQPSTEVDLFISTEKIMVLNTDLKEIMMDHALRTISYIADIGDLVVLMA 873
            |.||:.|:|  ||:||:||.||||||:||::|.||..|.:|.||||||.||||.||||.::||||
Human   246 AREAMDRVK--APDGETQPMTEVDLFVSTKRIKVLTADSQEAMMDHALHTISYTADIGCVLVLMA 308

  Fly   874 RRRFVPNSVVDPSITSPLGDVPTPGIGEEESPPKEPLSKH-NRTPKMICHVFESDEAQFIAQSIG 937
            |||              |...|.|             ..| .|..||:||||.:::||.|||:||
Human   309 RRR--------------LARRPAP-------------QDHGRRLYKMLCHVFYAEDAQLIAQAIG 346

  Fly   938 QAFQVAYMEFLKANGIENESLAKEMDYQEVLNSQEIFGDELEIFAKKELQKEVVVPKAKGEILGV 1002
            |||..||.:||:.:||:    ..::.......:..:...:|:.|:..:..:||.:.|.:||.|||
Human   347 QAFAAAYSQFLRESGID----PSQVGVHPSPGACHLHNGDLDHFSNSDNCREVHLEKRRGEGLGV 407

  Fly  1003 VIVESGWGSMLPTVVIANLMSSGAAARCGQLNIGDQLIAINGMSLVGLPLSTCQSYIRNAKNQTA 1067
            .:|||||||:|||.|||||:..|.|.|.|.|:|||:|.||||.|||||||:.||:.:|..|:||:
Human   408 ALVESGWGSLLPTAVIANLLHGGPAERSGALSIGDRLTAINGTSLVGLPLAACQAAVRETKSQTS 472

  Fly  1068 VKFTVVPCPPVVEVKILRPKALFQLGFSVQNGVI 1101
            |..::|.||||....|.||.|..||||.|::|::
Human   473 VTLSIVHCPPVTTAIIHRPHAREQLGFCVEDGIV 506

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
X11LNP_001285376.1 PTB_X11 775..954 CDD:269919 92/179 (51%)
PDZ_signaling 988..1065 CDD:238492 47/76 (62%)
PDZ_signaling 1092..1151 CDD:238492 5/10 (50%)
APBA3XP_006723013.1 PTB_X11 212..364 CDD:269919 93/184 (51%)
PDZ 394..477 CDD:278991 50/82 (61%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3605
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002645
OrthoInspector 1 1.000 - - mtm8492
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12345
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2607
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
87.900

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