DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment X11L and Pard3

DIOPT Version :9

Sequence 1:NP_001285376.1 Gene:X11L / 252671 FlyBaseID:FBgn0026313 Length:1170 Species:Drosophila melanogaster
Sequence 2:XP_006531583.1 Gene:Pard3 / 93742 MGIID:2135608 Length:1337 Species:Mus musculus


Alignment Length:739 Identity:152/739 - (20%)
Similarity:238/739 - (32%) Gaps:254/739 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   522 EIADASESMTMVPDADNPLDSHYGAVYAAALGGTHTEKSAGSGLGVTPVTAGGSLPSQAASEIQE 586
            ::||..:.:..|.|..:|  .|.|...:|:..||.:.:..||.||...|:|  ..|.||.|||  
Mouse    67 DVADDKDRLVAVFDEQDP--HHGGDGTSASSTGTQSPEIFGSELGTNNVSA--FQPYQATSEI-- 125

  Fly   587 AMKEIRSALQRAKTQPEKLKFCDEVLPTDPDSPVWVPRKGTTISTAQGAAADEEPDTDLETDRLL 651
               |:..::.||                  :.|:.|.|                           
Mouse   126 ---EVTPSVLRA------------------NMPLHVRR--------------------------- 142

  Fly   652 GQQRHDEQDFFADQSLADNNANEGTDIASNGHLNGTSDNN----NPNPMNNSKPQTYSTATIRQG 712
                                   .:|.|..|.....||||    .|:..|   |..:||..   |
Mouse   143 -----------------------SSDPALTGLSTSVSDNNFSSEEPSRKN---PTRWSTTA---G 178

  Fly   713 IGTSLTPNSPDICQIVGTTDISISSPEKLQFTKSPTG-SIKSLKDSANSDKKA-----------K 765
            .....|..||..|.  ...|.:..|     ..:.|:. |.:..:|:|.|...|           :
Mouse   179 FLKQNTAGSPKTCD--RKKDENYRS-----LPRDPSSWSNQFQRDNARSSLSASHPMVDRWLEKQ 236

  Fly   766 SRNKEGLLEPKVLIEGVLFRARYLGSTQLVCEGQPTKSTRMMQAEEAVSR--------------- 815
            .:::||..|....:|.|       |......|..|..|...|.....|..               
Mouse   237 EQDEEGTEEDSSRVEPV-------GHADTGLENMPNFSLDDMVKLVQVPNDGGPLGIHVVPFSAR 294

  Fly   816 --------IKALAPEGESQPSTEVDLFISTEKIMVLNT-DLKEIMMD---HALRTISYIADIGDL 868
                    :|.|...|:::   :.:||...:.|:.:|. ||:....:   |..|.......|...
Mouse   295 GGRTLGLLVKRLEKGGKAE---QENLFHENDCIVRINDGDLRNRRFEQAQHMFRQAMRARVIWFH 356

  Fly   869 VVLMARR-----------------RFVPNS--VVDPSI--TSPLGDVPTPGIGEEESPPKEPLSK 912
            ||..|.:                 ||.|:|  |.:.|:  .:|......|.:    |.|.|.|..
Mouse   357 VVPAANKEQYEQLSQREKNNYSPGRFSPDSHCVANRSVANNAPQALPRAPRL----SQPPEQLDA 417

  Fly   913 HNRTPKMICHVFESDEAQFIAQSIGQAFQVAYMEFLKANGIENESLAKEMDYQEVLNSQEIFGDE 977
            |.|.|.. .|......|         |..:|....|..|            ...|.|:::: |..
Mouse   418 HPRLPHS-AHASTKPPA---------APALAPPSVLSTN------------VGSVYNTKKV-GKR 459

  Fly   978 LEIFAKKELQKEVVVPKAKGEILGVVIV--ESGWGSMLPTVVIANLMSSGAAARCGQLNIGDQLI 1040
            |.|..||..           |.||..|.  :...|...| :.:.|::..|||.:.|:|..||:||
Mouse   460 LNIQLKKGT-----------EGLGFSITSRDVTIGGSAP-IYVKNILPRGAAIQDGRLKAGDRLI 512

  Fly  1041 AINGMSLVGLPLSTCQSYIRNAKNQTAVKFTV------------------VPCPPVVEVK----I 1083
            .:||:.|.|.......|.:|:.|.:..|...|                  :..|...:.:    :
Mouse   513 EVNGVDLAGKSQEEVVSLLRSTKMEGTVSLLVFRQEEAFHPREMNAEPSQMQTPKETKAEDEDVV 577

  Fly  1084 LRPKALFQ---------------LGFSVQN----------GV-ICSLLRGGIAERGG-VRVGHRI 1121
            |.|....:               ||.||:.          |: :.|::.||.|.:.| :||..::
Mouse   578 LTPDGTREFLTFEVPLNDSGSAGLGVSVKGNRSKENHADLGIFVKSIINGGAASKDGRLRVNDQL 642

  Fly  1122 IEINNQSVVAVPHDTIVKLLSSSV 1145
            |.:|.:|::...:...::.|..|:
Mouse   643 IAVNGESLLGKANQEAMETLRRSM 666

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
X11LNP_001285376.1 PTB_X11 775..954 CDD:269919 44/226 (19%)
PDZ_signaling 988..1065 CDD:238492 23/78 (29%)
PDZ_signaling 1092..1151 CDD:238492 17/66 (26%)
Pard3XP_006531583.1 DUF3534 2..83 CDD:338230 4/15 (27%)
PDZ_signaling 272..347 CDD:238492 12/77 (16%)
PDZ_signaling 465..544 CDD:238492 26/90 (29%)
PDZ_signaling 588..681 CDD:238492 17/79 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.